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BetaWB: modelling and simulating biological processes

机译:BetaWB:建模和模拟生物过程

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摘要

This paper presents BetaWB, a framework for modelling andrnsimulating biological processes. The modelling language isrnbased on b-binders, a process calculus developed for betterrnrepresenting biological interactions. In order to providernefficient and accurate stochastic simulation, a new stochasticrnselection algorithm, based on the Gillespie assumption, isrnpresented. Moreover, two companion graphical tools for thernmodel development and simulation results analysis are provided.
机译:本文介绍了BetaWB,一个用于建模和模拟生物过程的框架。建模语言基于b-binds,这是一种为更好地表示生物相互作用而开发的过程演算。为了提供高效,准确的随机模拟,提出了一种基于吉莱斯皮假设的新的随机选择算法。此外,提供了两个用于图形化开发和仿真结果分析的辅助图形工具。

著录项

  • 来源
  • 会议地点 San Diego CA(US);San Diego CA(US)
  • 作者单位

    The Microsoft Research - University of Trento Centre for Computational and Systems Biology Information and Communication Technology Department, University of Trento, dematte@cosbi.eu;

    rnThe Microsoft Research - University of Trento Centre for Computational and Systems Biology Information and Communication Technology Department, University of Trento, priami@cosbi.eu;

    rnThe Microsoft Research - University of Trento Centre for Computational and Systems Biology Information and Communication Technology Department, University of Trento, romanelg@cosbi.eu;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 计算机仿真;
  • 关键词

    process calculi; systems biology; stochastic simulation;

    机译:过程计算;系统生物学;随机模拟;

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