Application of immune algorithm in molecular docking

机译：免疫算法在分子对接中的应用

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摘要

As a kind of intelligent algorithm, the immune algorithm is improved from genetic algorithm by adopting the density adjusting mechanism to avoid from prematurity, and by good gene resaving mechanism to speed up convergence. To test the effectiveness of the algorithm, numerical example is first adopted; and then, the algorithm is applied into molecular docking, and gain better result than DOCK6_1.

机译：作为一种智能算法，免疫算法是对遗传算法的改进，采用了密度调节机制来避免过早发生，并通过良好的基因保存机制来加速收敛。为了验证算法的有效性，首先采用数值例子。然后将该算法应用于分子对接，比DOCK6_1获得更好的结果。

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来源
《2014 IEEE International Conference on Security, Pattern Analysis, and Cybernetics》|2014年|122-125|共4页
会议地点 Wuhan(CN)
作者
Zhen-yu Liu; Ming-hua Chen; Ling Kang;
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作者单位

Department of Computer Science and Technology, Dalian Neusoft University of Information, Dalian, P.R. China;

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会议组织
原文格式 PDF
正文语种 eng
中图分类
关键词
Convergence; Decision support systems; Encoding; Force; Genetic algorithms; Genetics; Radio frequency; Density adjustment; Good gene resaving mechanism; Immune algorithm; Molecular docking;

机译：收敛；决策支持系统；编码；强制；遗传算法；遗传学；无线电频率；密度调整；良好的基因保存机制；免疫算法；分子对接；;

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1. Tribe-PSO: A novel global optimization algorithm and its application in molecular docking [J] . Kai Chen, Tonghua Li, Tongcheng Cao Chemometrics and Intelligent Laboratory Systems . 2006,第1a2期

机译：Tribe-PSO：一种新颖的全局优化算法及其在分子对接中的应用
2. Prediction of Deleterious Non-synonymous SNPs of Human STK11 Gene by Combining Algorithms, Molecular Docking, and Molecular Dynamics Simulation [J] . Jahirul Islam, Akib Mahmud Khan, Rimon Parves, Scientific reports. . 2019,第1期

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3. Detailed analysis of grid-based molecular docking: A case study of CDOCKER - A CHARMm-based MD docking algorithm [J] . Wu GS., Robertson DH., Brooks CL., Journal of Computational Chemistry: Organic, Inorganic, Physical, Biological . 2003,第13期

机译：基于网格的分子对接的详细分析：以CDOCKER为例-基于CHARMm的MD对接算法
4. Study of Expanded Application of Molecular Docking on Virtual Screening - The case of molecular docking study of Keap1 and Michael Reaction Acceptor Molecules [C] . Xiuli Lu, Shuchao Chen, Yong Zhang, International Conference on Remote Sensing, Environment and Transportation Engineering . 2011

机译：分子对接对虚拟筛选的扩展应用研究 - Keap1和Michael反应受体分子的分子对接研究的情况
5. Solvation and receptor flexibility in molecular docking: Algorithm development and application to drug design. [D] . Wei, Binqing. 2003

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6. Extension of a Protein Docking Algorithm to Membranes and Applications to Amyloid Precursor Protein Dimerization [O] . Shruthi Viswanath, Laura Dominguez, Leigh S. Foster, -1

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7. Detailed analysis of grid-based molecular docking: A case study of CDOCKER-A CHARMm-based MD docking algorithm [O] . Guosheng Wu, Daniel H. Robertson, Charles L. Brooks Iii, 2003

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8. Comparing Evolutionary Programs and Evolutionary Pattern Search Algorithms: A Drug Docking Application [R] . Hart, W. E. 1999

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Application of immune algorithm in molecular docking

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