Attenuation Regulation as a Term Rewriting System

机译：衰减规则作为术语重写系统

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摘要

The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an operon by a term, and we give a probabilistic term rewriting system modeling the whole process of such a regulation.

机译：考虑了细菌中基因表达的经典衰减调节。我们建议用一个术语来表示基因或操纵子前导区中的二级RNA结构，并给出一个概率术语重写系统，对这种调控的整个过程进行建模。

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来源
《International Conference on Algebraic Biology(AB 2007); 20070702-04; Castle of Hagenberg(AT)》|2007年|P.81-94|共14页
会议地点 Castle of Hagenberg(AT)
作者
Eugene Asarin; Thierry Cachat; Alexander Seliverstov; Tayssir Touili; Vassily Lyubetsky;
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作者单位

LIAFA, CNRS and University Paris Diderot;

IITP, Russian Academy of Science;

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会议组织
原文格式 PDF
正文语种 eng
中图分类代数、数论、组合理论;生物工程学（生物技术）;
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3. Narrowing-based effective rewriting and its termination for term rewriting systems with extra variables [J] . Naoki Nishida, Masahiko Sakai, Toshiki Sakabe 電子情報通信学会技術研究報告. コンピュテ-ション. Theoretical Foundations of Computing . 2002,第593期

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4. Attenuation Regulation as a Term Rewriting System [C] . Eugene Asarin, Thierry Cachat, Alexander Seliverstov, International Conference on Algebraic Biology . 2007

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5. Term Rewriting Systems and the Church-Rosser Property [D] . 外山芳人 1990

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6. Rewriting and suppressing UMLS terms for improved biomedical term identification [O] . Kristina M Hettne, Erik M van Mulligen, Martijn J Schuemie, 2010

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7. Attenuation Regulation as a Term Rewriting System [O] . Asarin Eugene, Cachat Thierry, Seliverstov Alexander, 2007

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8. Derived Pairs, Overlap Closures, and Rewrite Dominoes: New Tools for Analyzing Term Rewriting Systems [R] . Guttag, J. V., Kapur, D., Musser, D. R. 1981

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Attenuation Regulation as a Term Rewriting System

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