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Conformational states and transitions in green fluorescent protein chromophore studied by single molecule SERS.

机译:通过单分子SERS研究的绿色荧光蛋白发色团的构象状态和跃迁。

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摘要

Green fluorescent protein (GFP) from Aequorea victoria won the Nobel Prize in 2008 for its revolutionary impact on bio-imaging. However, conformational states of its chromophore as well as transitions between them are not understood well. Using "nanometal-on-semiconductor" SERS substrates, the present work acquires the vibrational spectra of single GFP molecules under 532 nm laser excitation. Once an aliquot of 10-9 M GFP is spotted on a SERS substrate and a Raman acquisition is started, intense and well-resolved peaks are observed to appear and disappear repeatedly over a weak background. These temporal "spectral jumps" are captured in every half a minute on the average and sustain for 1 s or less. Each jump is associated with a single GFP molecule diffusing into a high SERS enhancement factor site (i.e., a "hotspot"), residing it for 1 s or less, and eventually diffusing out of it. The SERS is acquired in time series at continuous intervals of 50-100 ms. A minimum of 4 conformational states of the GFP chromophore were observed as cis/trans and protonated/deprotonated combinations. Statistical analysis of the GFP populations at different states reveals substantial presence of all 4 states. Among the 4 states, the transitions occur in between certain pairs of states that line-up in a cyclic pattern. Further, as inferred from the calculated transition probabilities, particular transitions become more probable under 532 nm excitation. Consequently, this bias leads to the increased population of certain states that is pronounced more with increasing laser intensity.
机译:维多利亚水母的绿色荧光蛋白(GFP)因其对生物成像的革命性影响而获得2008年诺贝尔奖。然而,它的发色团的构象状态以及它们之间的过渡不是很清楚。使用“半导体上的纳米金属” SERS衬底,本工作获得了532 nm激光激发下单个GFP分子的振动光谱。一旦在SERS底物上点了10-9 M GFP等分试样并开始拉曼采集,就可以观察到强烈且分辨率良好的峰在弱背景下反复出现和消失。这些时间上的“频谱跳跃”平均每半分钟捕获一次,并持续1 s或更短时间。每次跳跃都与单个GFP分子相关联,该分子扩散到高SERS增强因子位点(即“热点”)中,停留1 s或更短的时间,并最终扩散出其中。 SERS以50-100 ms的连续时间间隔按时间序列获取。观察到GFP发色团的至少4个构象状态为顺式/反式和质子化/去质子化的组合。对不同状态下GFP种群的统计分析表明,所有4个状态均存在。在这四个状态中,转换发生在以循环模式排列的某些状态对之间。此外,从计算的跃迁概率推断,特定跃迁在532 nm激发下变得更有可能。因此,这种偏置导致某些状态的增加,这随着激光强度的增加而更加明显。

著录项

  • 作者

    Khurshid, Md Shafayet.;

  • 作者单位

    Oklahoma State University.;

  • 授予单位 Oklahoma State University.;
  • 学科 Engineering Mechanical.;Engineering Materials Science.;Biophysics General.;Nanoscience.
  • 学位 M.S.
  • 年度 2011
  • 页码 114 p.
  • 总页数 114
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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