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Roles of serine 101, histidine 310 and valine 464 in the reaction catalyzed by cholin oxidase from Arthrobacter globiformis.

机译:丝氨酸101,组氨酸310和缬氨酸464在来自球形节杆菌的胆碱氧化酶催化的反应中的作用。

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摘要

The enzymatic oxidation of choline to glycine betaine is of interest because organisms accumulate glycine betaine intracellularly in response to stress conditions, as such it is of potential interest for the genetic engineering of crops that do not naturally possess efficient pathways for the synthesis of glycine betaine, and for the potential development of drugs that target the glycine betaine biosynthetic pathway in human pathogens. To date, one of the best characterized enzymes belonging to this pathway is the flavin-dependent choline oxidase from Arthrobacter globiformis. In this enzyme, choline oxidation proceeds through two reductive half-reactions and two oxidative half-reactions. In each of the reductive half-reactions the FAD cofactor is reduced to the anionic hydroquinone form (2 e- reduced) which is followed by an oxidative half-reaction where the reduced FAD cofactor is reoxidized by molecular oxygen with formation and release of hydrogen peroxide. In this dissertation the roles of selected residues, namely histidine at position 310, valine at position 464 and serine at position 101, that do not directly participate in catalysis in the reaction catalyzed by choline oxidase have been elucidated. The effects on the overall reaction kinetics of these residues in the protein matrix were investigated by a combination of steady state kinetics, rapid kinetics, pH, mutagenesis, substrate deuterium and solvent isotope effects, viscosity effects as well as X-ray crystallography.;A comparison of the kinetic data obtained for the variant enzymes to previous data obtained for wild-type choline oxidase are consistent with the valine residue at position 464 being important for the oxidative half-reaction as well as the positioning of the catalytic groups in the active site of the enzyme. The kinetic data obtained for the serine at position 101 shows that serine 101 is important for both the reductive and oxidative half-reactions. Finally, the kinetic data for histidine at position 310 suggest that this residue is essential for both the reductive and oxidative half-reactions.;Index words. Choline oxidase, Flavin oxidation, Oxygen reactivity, Proton-transfer network, Chemical mechanism, Flavoprotein.
机译:酶将胆碱酶氧化为甘氨酸甜菜碱是令人感兴趣的,因为生物体在胁迫条件下会在细胞内积累甘氨酸甜菜碱,因此,对于自然没有甘氨酸甜菜碱合成有效途径的农作物的基因工程,这可能引起人们的兴趣,以及针对人类病原体中甘氨酸甜菜碱生物合成途径的药物的潜在开发。迄今为止,属于该途径的最典型的酶之一是球形节杆菌的黄素依赖性胆碱氧化酶。在这种酶中,胆碱氧化通过两个还原性半反应和两个氧化性半反应进行。在每个还原半反应中,FAD辅因子都还原为阴离子对苯二酚形式(2 e-还原),然后是氧化半反应,其中还原的FAD辅因子被分子氧再氧化,形成并释放出过氧化氢。 。在本文中,已经阐明了在胆碱氧化酶催化的反应中不直接参与催化的所选残基的作用,即在位置310处的组氨酸,在位置464处的缬氨酸和在位置101处的丝氨酸。通过稳态动力学,快速动力学,pH,诱变,底物氘和溶剂同位素效应,粘度效应以及X射线晶体学研究了蛋白质基质中这些残基对整体反应动力学的影响。将变体酶获得的动力学数据与野生型胆碱氧化酶获得的先前数据进行比较,这与第464位的缬氨酸残基对于氧化半反应以及催化位点在活性位点的定位很重要酶。从位置101处的丝氨酸获得的动力学数据表明,丝氨酸101对于还原和氧化半反应都是重要的。最后,在位置310处的组氨酸动力学数据表明,该残基对于还原和氧化半反应都是必不可少的。胆碱氧化酶,黄素氧化,氧反应性,质子转移网络,化学机理,黄素蛋白。

著录项

  • 作者

    Finnegan, Steffan.;

  • 作者单位

    Georgia State University.;

  • 授予单位 Georgia State University.;
  • 学科 Chemistry Biochemistry.
  • 学位 Ph.D.
  • 年度 2010
  • 页码 246 p.
  • 总页数 246
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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