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Fabrication of nanopore systems and their application to DNA manipulation.

机译:纳米孔系统的制造及其在DNA操作中的应用。

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摘要

Nanopore system is important for its many promising applications in rapid DNA sequencing, large biological molecule detection, polynucleotide-enzyme interaction study and etc. Following the first introduction of nanopores for polynucleotide study twelve years ago, many research studies have focused on the development of synthetic nanopore systems, due to its adjustability and adaptability for meeting various application needs, and the potential integration into future nano devices.;Given the broad potential technological importance, it's highly desirable to develop a reliable yet convenient fabrication method for nanopore system. We introduce a novel fast and low-cost technique for fabricating nanopore system with soft materials, employing a low-power laser with lithography-free substrate preparation. A model of surface-tension driven mass flow is proposed to describe its mechanism of formation. We further demonstrate the soft nanopore system's capability for sensing biological molecules with DNA characterization experiments.;A solid-state nanopore based system with optical access is introduced for the purpose of manipulating DNA-tethered microspheres near the nanopore using optical tweezers. We use optical trap to anchor lambda-DNA-tethered microspheres in close proximity (1 ∼ 3mum) to the solid-state nanopore, and study the ionic conductance through the voltage-biased nanopore. At high voltage (-100mV to -300mV), we observe hundreds of free-DNA-translocation-like current suppressions. We present the finding and discuss its possible underlying mechanism.
机译:纳米孔系统对于其在快速DNA测序,大生物分子检测,多核苷酸-酶相互作用研究等方面的许多有前途的应用非常重要。在十二年前首次将纳米孔用于多核苷酸研究之后,许多研究都集中在合成的开发上。纳米孔系统,由于其可调节性和适应性,可以满足各种应用需求,并有可能集成到未来的纳米器件中。鉴于广泛的潜在技术重要性,迫切需要开发一种可靠而方便的纳米孔系统制造方法。我们介绍了一种新的快速且低成本的技术,该技术用于使用软材料制造纳米孔系统,并采用低功率激光和无光刻技术的基板制备方法。提出了表面张力驱动的质量流模型来描述其形成机理。我们进一步通过DNA表征实验证明了软纳米孔系统对生物分子的感应能力。引入了基于固态纳米孔的光学访问系统,目的是使用光镊操纵纳米孔附近的DNA拴系微球。我们使用光阱将λ-DNA固定的微球锚定在固态纳米孔附近(1〜3μm),并研究通过电压偏置的纳米孔的离子电导。在高电压(-100mV至-300mV)下,我们观察到数百种类似DNA易位的电流抑制。我们提出这一发现并讨论其可能的潜在机制。

著录项

  • 作者

    Wu, Shanshan.;

  • 作者单位

    Brown University.;

  • 授予单位 Brown University.;
  • 学科 Engineering Biomedical.
  • 学位 Ph.D.
  • 年度 2009
  • 页码 96 p.
  • 总页数 96
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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