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Mid-infrared and near-infrared vibrational circular dichroism: New methodologies for biological and pharmaceutical applications.

机译:中红外和近红外振动圆二色性:用于生物和制药应用的新方法。

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摘要

New methodologies have been developed at the cutting-edge of Fourier transform vibrational circular dichroism (FT-VCD) spectroscopy aimed at various pharmaceutical and biological applications. VCD spectra of a series of proteins with different secondary structures were obtained with a modified ChiralIR (BioTools, Jupiter, FL) FT-VCD spectrometer in the near-infrared (near-IR) region from 6000 to 4000 cm-1 and the mid-infrared (mid-IR) region from 2000 to 800 cm-1. High quality mid-IR-VCD spectra were obtained to support accurate quantitative analysis based on VCD data. The NIR-VCD spectra of proteins show distinct spectral features for different protein structural motifs, indicating a new valuable method to study protein structures.;Two-dimensional correlation VCD spectroscopy (2D-COS VCD) is developed to enhance the applications of VCD. The pD-dependence of the VCD and IR spectra of Lalanine in D2O solution in the mid-IR CH-bending and CH-stretching regions, and near-IR region are presented. Analysis of the 2D correlation plots provide further insight into the relative sensitivities of structural changes that take place in L-alanine as a function of pD. Near-IR band assignments are facilitated by hetero-spectral-region 2D-COS spectra that correlate the combination band region to that of the underling fundamental modes. Furthermore, 2D COS VCD was applied to investigate structures of insulin fibrils during the formation process. New insight into the functional groups associated with the fibrillation process is thereby obtained.;Enhanced VCD and magnetic VCD (MVCD) in transition metal complexes are presented. Similar to previous VCD results, resonance-enhanced MVCD spectra are observed for a series of complexes with open-shell transition metals at coordination sites, further confirming that the resonance enhancement comes from low-lying excited electronic states (LLESs). Moreover, regular MVCD are obtained from several complexes without LLESs, suggesting a promising research method for structural determination of a wide range of molecules.;The structure of amylose tris-(dimethylphenylcarbamate) (ADMPC) and its conformational changes with respect to polar solvents were investigated by VCD for the first time. By providing rich information on a number of different functional groups, VCD was shown to be a powerful and innovative molecular-level probe to study the structures of this type of chiral polymer. In addition, the conformations of side chains and the backbone of ADMPC were monitored using VCD in the solid film state in the presence of different concentrations of alcohols. VCD results revealed new insight into the behavior of ADMPC in the presence of these polar solvents when in combination with nonpolar solvents such as hexane.;For the first time, VCD spectroscopy is applied to study the structures and associated formation dynamics of insulin and lysozyme proteins fibrils. Mid-IR VCD spectra show remarkable sensitivity to these protein fibrils which are beta-rich structural fibrils developed under the conditions of heating native protein solutions at low pH, indicating that VCD is a powerful tool to study such complex systems. In addition, VCD shows successful results on monitoring the protein structural changes during fibrillation. The potential for new insight into the mechanism and dynamics of the fibril formation process is elucidated.
机译:在傅立叶变换振动圆二色性(FT-VCD)光谱学的最前沿已经开发出了新的方法论,其针对各种药物和生物学应用。使用改良的ChiralIR(BioTools,Jupiter,FL)FT-VCD光谱仪在6000至4000 cm-1的近红外(in-IR)区域和中红外光谱中获得了一系列具有不同二级结构的蛋白质的VCD光谱。红外(中红外)范围从2000到800 cm-1。获得了高质量的中红外VCD光谱,以支持基于VCD数据的准确定量分析。蛋白质的NIR-VCD光谱显示出不同蛋白质结构基序的独特光谱特征,这为研究蛋白质结构提供了一种新的有价值的方法。二维相关VCD光谱法(2D-COS VCD)的开发是为了增强VCD的应用。提出了在中红外CH弯曲和CH拉伸区域以及近红外区域,D2O溶液中丙氨酸的VCD和IR光谱的pD依赖性。二维相关图的分析可进一步了解L-丙氨酸中pD的结构变化的相对敏感性。通过将组合频段区域与基础基本模式的频段区域相关联的异光谱区域2D-COS光谱,可以方便地进行近红外频段分配。此外,二维COS VCD用于研究胰岛素原纤维的结构。从而获得了与原纤化过程相关的官能团的新见解。提出了过渡金属配合物中增强的VCD和磁性VCD(MVCD)。与以前的VCD结果相似,在配位点处带有开壳过渡金属的一系列配合物观察到共振增强的MVCD光谱,进一步证实共振增强来自低位激发电子态(LLESs)。此外,从几种没有LLES的配合物中获得常规的MVCD,这为用于测定多种分子的结构提供了一种有前途的研究方法。;直链淀粉三-(二甲基苯基氨基甲酸酯)(ADMPC)的结构及其相对于极性溶剂的构象变化是VCD首次调查。通过提供有关许多不同官能团的丰富信息,VCD被证明是研究这种手性聚合物结构的有力且创新的分子水平探针。另外,在不同浓度的醇存在下,使用VCD以固态膜状态监测ADMPC的侧链和主链的构象。 VCD结果揭示了与这些非极性溶剂(如己烷)结合使用时,在这些极性溶剂存在下ADMPC的行为的新见解;首次将VCD光谱用于研究胰岛素和溶菌酶蛋白的结构及其相关的形成动力学原纤维。中红外VCD光谱显示出对这些蛋白质原纤维的显着敏感性,这些蛋白质原纤维是在低pH下加热天然蛋白质溶液的条件下形成的富含β的结构原纤维,表明VCD是研究此类复杂系统的有力工具。另外,VCD显示了在原纤化过程中监测蛋白质结构变化的成功结果。阐明了对原纤维形成过程的机理和动力学的新见解的潜力。

著录项

  • 作者

    Ma, Shengli.;

  • 作者单位

    Syracuse University.;

  • 授予单位 Syracuse University.;
  • 学科 Chemistry Analytical.
  • 学位 Ph.D.
  • 年度 2008
  • 页码 187 p.
  • 总页数 187
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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