First detection and complete genome of Soybean chlorotic mottle virus naturally infecting soybean in China by deep sequencing

HU Qian-qian; LIU Xue-jian; HAN Xue-dong; LIU Yong; JIANG Jun-xi; XIE Yan

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First detection and complete genome of Soybean chlorotic mottle virus naturally infecting soybean in China by deep sequencing

机译：深度测序法首次发现中国天然感染大豆的大豆绿斑驳病毒

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Soybean chlorotic mottle virus(SbCMV)was first detected from soybean plants in Jiangxi Province of China by high throughput sequencing and was confirmed by PCR.The complete nucleotide sequence of NC113 was determined to be 8210 nucleotides,and shared the highest similarity(91.7%)with sequences of SbCMV that was only reported in Japan.It encodes nine putative open reading frames(ORFs Ia,Ib and Ⅱ-Ⅷ),and contains a large intergenic region located at nucleotide 5976-6512 between ORFs VI and VII.Sequence analysis and phylogenetic tree indicated that NC113 is an isolate of SbCMV,and is more related to the soymoviruses Blueberry red ringspot virus(BRRSV),Peanut chlorotic streak virus(PCSV)and Cestrum yellow leaf curling virus(CmYLCV)than to other representative members in the Caulimoviridae family.Field survey of 472 legume plants from Jiangxi and Zhejiang provinces showed SbCMV was only detected from soybean in Nanchang City with a low incidence rate.This is the first report of Soybean chlorotic mottle virus identified in China.

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《农业科学学报（英文版）》 |2019年第11期|2664-2667|共4页
作者
HU Qian-qian; LIU Xue-jian; HAN Xue-dong; LIU Yong; JIANG Jun-xi; XIE Yan;
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作者单位

State Key Laboratory of Rice Biology Institute of Biotechnology Zhejiang University Hangzhou 310058 P.R.China;

Hunan Plant Protection Institute Changsha 410125 P.R.China;

College of Agriculture Jiangxi Agricultural University Nanchang 330000 P.R.China;

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First detection and complete genome of Soybean chlorotic mottle virus naturally infecting soybean in China by deep sequencing

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