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《中国海洋大学学报：英文版》
>Determination of Internal Controls for Quantitative Gene Expression of Isochrysis zhangjiangensis at Nitrogen Stress Condition
Determination of Internal Controls for Quantitative Gene Expression of Isochrysis zhangjiangensis at Nitrogen Stress Condition
Isochrysis zhangjiangensis is a potential marine microalga for biodiesel production,which accumulates lipid under nitrogen limitation conditions,but the mechanism on molecular level is veiled.Quantitative real-time polymerase chain reaction(q PCR) provides the possibility to investigate the gene expression levels,and a valid reference for data normalization is an essential prerequisite for firing up the analysis.In this study,five housekeeping genes,actin(ACT),α-tubulin(TUA),β-tubulin(TUB),ubiquitin(UBI),18 S r RNA(18S) and one target gene,diacylglycerol acyltransferase(DGAT),were used for determining the reference.By analyzing the stabilities based on calculation of the stability index and on operating the two types of software,ge Norm and bestkeeper,it showed that the reference genes widely used in higher plant and microalgae,such as UBI,TUA and 18 S,were not the most stable ones in nitrogen-stressed I.zhangjiangensis,and thus are not suitable for exploring the m RNA expression levels under these experimental conditions.Our results show that ACT together with TUB is the most feasible internal control for investigating gene expression under nitrogen-stressed conditions.Our findings will contribute not only to future q PCR studies of I.zhangjiangensis,but also to verification of comparative transcriptomics studies of the microalgae under similar conditions.
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