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C-5(6) Sterol Desaturase from Tetrahymena thermophila: Gene Identification and Knockout Sequence Analysis and Comparison to Other C-5(6) Sterol Desaturases

机译:嗜热四膜虫的C-5(6)甾醇去饱和酶:基因鉴定和敲除序列分析和与其他C-5(6)甾醇去饱和酶的比较

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摘要

The gene coding for a C-5(6) sterol desaturase in Tetrahymena thermophila, DES5A, has been identified by the knockout of the TTHERM_01194720 sequence. Macronucleus transformation was achieved by biolistic bombardment and gene replacement through phenotypic assortment, using paromomycin as the selective agent. A knockout cell line (KO270) showed a phenotype consistent with that of the DES5A deletion mutant. KO270 converted only 6% of the added sterol into the C-5 unsaturated derivative, while the wild type accumulated 10-fold larger amounts under similar conditions. The decreased desaturation activity is specific for the C-5(6) position of lathosterol and cholestanol; other desaturations, namely C-7(8) and C-22(23), were not affected. Analysis by reverse transcription-PCR reveals that DES5A is transcribed both in the presence and absence of cholestanol in wild-type cells, whereas the transcribed gene was not detected in KO270. The growth of KO270 was undistinguishable from that of the wild-type strain. Des5Ap resembles known C-5(6) sterol desaturases, displaying the three typical histidine motifs, four hydrophobic transmembrane regions, and two other highly conserved domains of unknown function. A phylogenetic analysis placed T. thermophila's enzyme and Paramecium orthologues in a cluster together with functionally characterized C-5 sterol desaturases from vertebrates, fungi, and plants, although in a different branch.
机译:已通过敲除TTHERM_01194720序列鉴定了嗜热四膜虫中编码C-5(6)甾醇去饱和酶的基因。使用巴龙霉素作为选择剂,通过生物弹轰击和通过表型分类的基因替换实现了大核转化。敲除细胞系(KO270)表现出与DES5A缺失突变体一致的表型。 KO270仅将添加的甾醇的6%转化为C-5不饱和衍生物,而野生型在相似条件下积累了10倍大的量。降低的去饱和活性是针对谷甾醇和胆固醇的C-5(6)位置所特有的;其他不饱和度,即C-7(8)和C-22(23),不受影响。通过逆转录PCR的分析显示在野生型细胞中存在和不存在胆固醇的情况下都转录了DES5A,而在KO270中未检测到转录的基因。 KO270的生长与野生株没有区别。 Des5Ap类似于已知的C-5(6)甾醇去饱和酶,显示出三个典型的组氨酸基序,四个疏水跨膜区域和两个其他功能未知的高度保守的域。系统发育分析将嗜热衣原体的酶和草履虫直系同源物与脊椎动物,真菌和植物的功能性特征化的C-5固醇脱氢酶放在一个簇中,尽管位于不同的分支中。

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