首页> 美国卫生研究院文献>Standards in Genomic Sciences >High-quality permanent draft genome sequence of Ensifer sp. PC2 isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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High-quality permanent draft genome sequence of Ensifer sp. PC2 isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India

机译:Ensifer sp。的高质量永久草图基因组序列。 PC2从印度塔尔沙漠原生的豆类树(Khejri)的固氮根瘤中分离出来

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摘要

Ensifer sp. PC2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a nitrogen-fixing nodule of the tree legume P. cineraria (L.) Druce (Khejri), which is a keystone species that grows in arid and semi-arid regions of the Indian Thar desert. Strain PC2 exists as a dominant saprophyte in alkaline soils of Western Rajasthan. It is fast growing, well-adapted to arid conditions and is able to form an effective symbiosis with several annual crop legumes as well as species of mimosoid trees and shrubs. Here we describe the features of Ensifer sp. PC2, together with genome sequence information and its annotation. The 8,458,965 bp high-quality permanent draft genome is arranged into 171 scaffolds of 171 contigs containing 8,344 protein-coding genes and 139 RNA-only encoding genes, and is one of the rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.Electronic supplementary materialThe online version of this article (doi:10.1186/s40793-016-0157-7) contains supplementary material, which is available to authorized users.
机译:恩斯弗(Ensifer)sp。 PC2是一种好氧的,能运动的,革兰氏阴性的,非孢子形成的杆,它是从生长在植物中的重要树种瓜果(P. cineraria(L.)Druce(Khejri))的固氮根瘤中分离出来的。印度塔尔沙漠的干旱和半干旱地区。 PC2菌株在拉贾斯坦邦西部的碱性土壤中以优势腐生植物的形式存在。它生长迅速,非常适应干旱条件,能够与几种一年生的豆类植物以及含羞草乔木和灌木形成有效的共生关系。在这里,我们描述Ensifer sp。的功能。 PC2,连同基因组序列信息及其注释。 8,458,965 bp的高质量永久基因组基因被安排在171个重叠群的171个支架中,其中包含8,344个蛋白质编码基因和139个仅RNA编码基因,并且是作为DOE Joint Genome Institute 2010 Genomic Encyclopedia的一部分测序的根瘤菌基因组之一电子补充材料本文的在线版本(doi:10.1186 / s40793-016-0157-7)包含补充材料,授权用户可以使用该补充材料,以供细菌和古细菌根瘤细菌(GEBA-RNB)项目提案使用。

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