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Updating a bibliography using the related articles function within PubMed.

机译:在PubMed中使用相关文章功能更新书目。

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摘要

Comprehensive bibliographies are useful for conducting reviews of the literature, and for assessing the progress within a field. These bibliographies may be broad and inclusive, or focused and precise in their inclusion criteria. In either case, the task of maintaining a complete bibliography within a particular area of research is made difficult by the diversity, complexity and huge volume of newly published literature. In an effort to effectively and automatically retrieve relevant literature, different search strategies and indexing tools have been developed, including the RELATED ARTICLES function provided with the PubMed system. In this paper, we report a program for incremental updates of a bibliography using the PubMed RELATED ARTICLES function. Given a highly specialized starting bibliography of experimental measurements of the structure of the 30S bacterial ribosomal subunit, the system was applied to find additional relevant references. For this particular task, the system has a recall of 75%, a strict precision of 32% and a partial precision of 42%. Our results are notable because although the RELATED ARTICLES function is purely statistical, it is nonetheless able to select a very narrowly defined set of articles from the literature. We discuss the tradeoffs between having a user to evaluate many articles of possible interest in a single session, versus asking a user to evaluate a small set of articles on a periodic basis.
机译:全面的书目可用于进行文献回顾和评估某个领域的进展。这些参考书目的收录标准可能是广泛而包容的,也可能是集中且精确的。无论哪种情况,由于新出版文献的多样性,复杂性和大量文献,使得在特定研究领域内维持完整书目的任务变得困难。为了有效和自动地检索相关文献,已经开发了不同的搜索策略和索引工具,包括PubMed系统随附的“相关文章”功能。在本文中,我们报告了一个使用PubMed相关文章功能进行书目增量更新的程序。给定高度专业的30S细菌核糖体亚基结构实验测量参考书目,该系统可用于查找其他相关参考文献。对于此特定任务,系统的召回率为75%,严格精度为32%,部分精度为42%。我们的结果很引人注目,因为尽管“相关文章”功能仅是统计数据,但仍能够从文献中选择一组非常狭窄的文章。我们讨论了让用户在单个会话中评估许多可能感兴趣的文章与要求用户定期评估一小组文章之间的权衡。

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