首页> 美国卫生研究院文献>Database: The Journal of Biological Databases and Curation >OGDD (Olive Genetic Diversity Database): a microsatellite markers genotypes database of worldwide olive trees for cultivar identification and virgin olive oil traceability
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OGDD (Olive Genetic Diversity Database): a microsatellite markers genotypes database of worldwide olive trees for cultivar identification and virgin olive oil traceability

机译:OGDD(橄榄遗传多样性数据库):全球橄榄树的微卫星标记基因型数据库用于品种鉴定和原始橄榄油可追溯性

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摘要

Olive (Olea europaea), whose importance is mainly due to nutritional and health features, is one of the most economically significant oil-producing trees in the Mediterranean region. Unfortunately, the increasing market demand towards virgin olive oil could often result in its adulteration with less expensive oils, which is a serious problem for the public and quality control evaluators of virgin olive oil. Therefore, to avoid frauds, olive cultivar identification and virgin olive oil authentication have become a major issue for the producers and consumers of quality control in the olive chain. Presently, genetic traceability using SSR is the cost effective and powerful marker technique that can be employed to resolve such problems. However, to identify an unknown monovarietal virgin olive oil cultivar, a reference system has become necessary. Thus, an Olive Genetic Diversity Database (OGDD) () is presented in this work. It is a genetic, morphologic and chemical database of worldwide olive tree and oil having a double function. In fact, besides being a reference system generated for the identification of unkown olive or virgin olive oil cultivars based on their microsatellite allele size(s), it provides users additional morphological and chemical information for each identified cultivar. Currently, OGDD is designed to enable users to easily retrieve and visualize biologically important information (SSR markers, and olive tree and oil characteristics of about 200 cultivars worldwide) using a set of efficient query interfaces and analysis tools. It can be accessed through a web service from any modern programming language using a simple hypertext transfer protocol call. The web site is implemented in java, JavaScript, PHP, HTML and Apache with all major browsers supported.>Database URL:
机译:橄榄(Olea europaea)的重要性主要归因于营养和健康特征,它是地中海地区最具经济意义的产油树种之一。不幸的是,市场对纯橄榄油的需求不断增加,往往会导致其掺假价格降低,这对于公众和纯橄榄油质量评估人员来说是一个严重的问题。因此,为了避免欺诈,橄榄品种鉴定和原始橄榄油认证已成为橄榄链质量控制的生产者和消费者的主要问题。目前,使用SSR进行遗传追溯是一种经济有效且功能强大的标记技术,可以用来解决此类问题。但是,为了鉴定未知的单品种初榨橄榄油品种,必须建立一个参考系统。因此,这项工作提出了一个橄榄遗传多样性数据库(OGDD)()。它是世界范围内具有双重功能的橄榄树和油脂的遗传,形态和化学数据库。实际上,除了是基于微卫星等位基因大小来识别未知橄榄或初榨橄榄油品种的参考系统外,它还为用户提供了每种鉴定出的品种的其他形态和化学信息。当前,OGDD旨在使用户能够使用一组有效的查询界面和分析工具轻松地检索和可视化重要的生物学信息(SSR标记以及全球约200个品种的橄榄树和油的特性)。可以使用简单的超文本传输​​协议调用,从任何现代编程语言通过Web服务访问它。该网站以Java,JavaScript,PHP,HTML和Apache实现,并支持所有主要浏览器。>数据库URL

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