The stock market is a complex system with unpredictable stock price fluctuations. When the positive feedback in the market amplifies, the systemic risk will increase rapidly. During the last 30 years of development, the mechanism and governance system of China’s stock market have been constantly improving, but irrational shocks have still appeared suddenly in the last decade, making investment decisions risky. Therefore, based on the daily return of all a-shares in China, this paper constructs a dynamic complex network of individual stocks, and represents the systemic risk of the market using the average weighting degree, as well as the adjusted structural entropy, of the network. In order to eliminate the influence of disturbance factors, empirical mode decomposition (EMD) and grey relational analysis (GRA) are used to decompose and reconstruct the sequences to obtain the evolution trend and periodic fluctuation of systemic risk. The results show that the systemic risk of China’s stock market as a whole shows a downward trend, and the periodic fluctuation of systemic risk has a long-term equilibrium relationship with the abnormal fluctuation of the stock market. Further, each rise of systemic risk corresponds to external factor shocks and internal structural problems.
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