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An HIV Feedback Resistor: Auto-Regulatory Circuit Deactivator and Noise Buffer

机译:HIV反馈电阻器:自动调节电路停用器和噪声缓冲器

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摘要

Animal viruses (e.g., lentiviruses and herpesviruses) use transcriptional positive feedback (i.e., transactivation) to regulate their gene expression. But positive-feedback circuits are inherently unstable when turned off, which presents a particular dilemma for latent viruses that lack transcriptional repressor motifs. Here we show that a dissipative feedback resistor, composed of enzymatic interconversion of the transactivator, converts transactivation circuits into excitable systems that generate transient pulses of expression, which decay to zero. We use HIV-1 as a model system and analyze single-cell expression kinetics to explore whether the HIV-1 transactivator of transcription (Tat) uses a resistor to shut off transactivation. The Tat feedback circuit was found to lack bi-stability and Tat self-cooperativity but exhibited a pulse of activity upon transactivation, all in agreement with the feedback resistor model. Guided by a mathematical model, biochemical and genetic perturbation of the suspected Tat feedback resistor altered the circuit's stability and reduced susceptibility to molecular noise, in agreement with model predictions. We propose that the feedback resistor is a necessary, but possibly not sufficient, condition for turning off noisy transactivation circuits lacking a repressor motif (e.g., HIV-1 Tat). Feedback resistors may be a paradigm for examining other auto-regulatory circuits and may inform upon how viral latency is established, maintained, and broken.
机译:动物病毒(例如慢病毒和疱疹病毒)使用转录阳性反馈(即反式激活)来调节其基因表达。但是正反馈电路在关闭时会固有地不稳定,这会给缺乏转录阻遏基序的潜伏病毒带来特殊的困境。在这里,我们显示了由反式激活剂的酶促互变组成的耗散反馈电阻器,将反式激活电路转换为可激发的系统,该系统产生瞬态表达脉冲,并衰减为零。我们使用HIV-1作为模型系统,并分析单细胞表达动力学,以探索HIV-1转录反式激活子(Tat)是否使用电阻器来关闭反式激活。发现Tat反馈电路缺乏双稳定性和Tat自合作性,但在反激活时显示出活动脉冲,所有这些都与反馈电阻器模型一致。在数学模型的指导下,可疑的Tat反馈电阻的生化和遗传扰动改变了电路的稳定性,并降低了对分子噪声的敏感性,与模型预测一致。我们建议反馈电阻器是关闭缺少阻遏物基序(例如HIV-1 Tat)的嘈杂反激活电路的必要条件,但可能还不够。反馈电阻器可能是检查其他自动调节电路的范例,并且可以告知病毒潜伏期如何建立,保持和破坏。

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