Motif-Based Prediction of Plant Tubulin Phosphorylation Sites Associated with Calcium-Dependent Protein Kinases in Arabidopsis thaliana

Karpov P. A.; Novozhylov D. O.; Isayenkov S. V.; Blume Ya. B.

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Motif-Based Prediction of Plant Tubulin Phosphorylation Sites Associated with Calcium-Dependent Protein Kinases in Arabidopsis thaliana

机译：基于主题的拟南芥中钙依赖性蛋白激酶相关的植物微管蛋白磷酸化位点的预测。

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摘要

New motifs for phosphorylation sites associated with calcium-dependent protein kinases were developed using 494 sites experimentally proved in mammalians. Subsequent motif-based search revealed consensus regions in -, -, and -tubulin from Arabidopsis thaliana. The analysis of selected candidate sites and comparison of sequences and structures of homological mammalian and plant protein kinases were performed. Bioinformatic analysis reveals Arabidopsis protein kinases CPK20 (At2g38910), CPK21 (AT4G04720), and GRIK2 (At5g60550) as probable contributors of the plant tubulin code.

机译：利用在哺乳动物中实验证明的494个位点，开发了与钙依赖性蛋白激酶相关的磷酸化位点的新基序。随后的基于主题的搜索显示了拟南芥中-，-和-微管蛋白的共有区域。进行了选定候选位点的分析，并比较了同源的哺乳动物和植物蛋白激酶的序列和结构。生物信息学分析表明拟南芥蛋白激酶CPK20（At2g38910），CPK21（AT4G04720）和GRIK2（At5g60550）是植物微管蛋白编码的可能贡献者。

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《Cytology and genetics》 |2018年第6期|428-439|共12页
作者
Karpov P. A.; Novozhylov D. O.; Isayenkov S. V.; Blume Ya. B.;
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作者单位

Natl Acad Sci Ukraine, Inst Food Biotechnol & Genom, UA-04123 Kiev, Ukraine;

Natl Acad Sci Ukraine, Inst Food Biotechnol & Genom, UA-04123 Kiev, Ukraine;

Natl Acad Sci Ukraine, Inst Food Biotechnol & Genom, UA-04123 Kiev, Ukraine;

Natl Acad Sci Ukraine, Inst Food Biotechnol & Genom, UA-04123 Kiev, Ukraine;

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正文语种 eng
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关键词
calcium-dependent protein kinases; phosphorylation; phosphorylation sites; tubulin; Arabidopsis thaliana;

机译：钙依赖性蛋白激酶;磷酸化;磷酸化位点;微管蛋白;拟南芥;

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1. CDPK1, an Arabidopsis thaliana calcium-dependent protein kinase, is involved in plant defense response [J] . Nie L., Wang R., Xia Y., Russian Journal of Plant Physiology . 2015,第6期

机译：CDPK1，拟南芥钙依赖性蛋白激酶，参与植物防御反应
2. Expression of a grape calcium-dependent protein kinase ACPK1 in Arabidopsis thaliana promotes plant growth and confers abscisic acid-hypersensitivity in germination, postgermination growth, and stomatal movement [J] . Xiang-Chun Yu, Sai-Yong Zhu, Gui-Feng Gao, Plant Molecular Biology . 2007,第5期

机译：拟南芥中葡萄钙依赖性蛋白激酶ACPK1的表达促进植物生长，并赋予脱落酸对发芽，发芽后生长和气孔运动的超敏性
3. Expression of a grape calcium-dependent protein kinase ACPK1 in Arabidopsis thaliana promotes plant growth and confers abscisic acid-hypersensitivity in germination, postgermination growth, and stomatal movement [J] . Yu XC, Zhu SY, Gao GF, Plant Molecular Biology . 2007,第5期

机译：拟南芥中葡萄钙依赖性蛋白激酶ACPK1的表达促进植物生长，并赋予脱落酸对发芽，发芽后生长和气孔运动超敏性
4. Identification of phosphorylation site of an Arabidopsis CNGC by a calcium-dependent protein kinase with TiO_(2) column enrichment and mass spectrometry [C] . Ing-Feng Chang, David Quilicy, Yoshimi Barron, ASMS Conference on Mass Spectrometry and Allied Topics . 2008

机译：用TiO_（2）柱富集和质谱法通过钙依赖性蛋白激酶鉴定Arabidopsis CNGC的磷酸化位点
5. Calcium-dependent protein kinases are myristoylated and associated with different membranes in Arabidopsis thaliana. [D] . Lu, Sheen Xun. 2003

机译：钙依赖性蛋白激酶是肉豆蔻酰化的，并与拟南芥中的不同膜有关。
6. PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor [O] . Joshua L. Heazlewood, Pawel Durek, Jan Hummel, -1

机译：PhosPhAt：拟南芥中磷酸化位点的数据库和植物特异性磷酸化位点的预测子
7. Function of calcium-dependent protein kinase CPK28 of Arabidopsis thaliana in plant stem elongation and vascular development [O] . Matschi, S., Werner, S., Schulze, W., 2013

机译：拟南芥钙依赖性蛋白激酶CpK28在植物茎伸长和血管发育中的作用

Motif-Based Prediction of Plant Tubulin Phosphorylation Sites Associated with Calcium-Dependent Protein Kinases in Arabidopsis thaliana

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