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首页> 外文期刊>BMC Medical Informatics and Decision Making >Accounting for seasonal patterns in syndromic surveillance data for outbreak detection
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Accounting for seasonal patterns in syndromic surveillance data for outbreak detection

机译:在症状监测数据中考虑季节性模式以进行暴发检测

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Background Syndromic surveillance (SS) can potentially contribute to outbreak detection capability by providing timely, novel data sources. One SS challenge is that some syndrome counts vary with season in a manner that is not identical from year to year. Our goal is to evaluate the impact of inconsistent seasonal effects on performance assessments (false and true positive rates) in the context of detecting anomalous counts in data that exhibit seasonal variation. Methods To evaluate the impact of inconsistent seasonal effects, we injected synthetic outbreaks into real data and into data simulated from each of two models fit to the same real data. Using real respiratory syndrome counts collected in an emergency department from 2/1/94–5/31/03, we varied the length of training data from one to eight years, applied a sequential test to the forecast errors arising from each of eight forecasting methods, and evaluated their detection probabilities (DP) on the basis of 1000 injected synthetic outbreaks. We did the same for each of two corresponding simulated data sets. The less realistic, nonhierarchical model's simulated data set assumed that "one season fits all," meaning that each year's seasonal peak has the same onset, duration, and magnitude. The more realistic simulated data set used a hierarchical model to capture violation of the "one season fits all" assumption. Results This experiment demonstrated optimistic bias in DP estimates for some of the methods when data simulated from the nonhierarchical model was used for DP estimation, thus suggesting that at least for some real data sets and methods, it is not adequate to assume that "one season fits all." Conclusion For the data we analyze, the "one season fits all " assumption is violated, and DP performance claims based on simulated data that assume "one season fits all," for the forecast methods considered, except for moving average methods, tend to be optimistic. Moving average methods based on relatively short amounts of training data are competitive on all three data sets, but are particularly competitive on the real data and on data from the hierarchical model, which are the two data sets that violate the "one season fits all" assumption.
机译:通过提供及时,新颖的数据源,背景综合监视(SS)可以潜在地提高爆发检测能力。 SS面临的一个挑战是,某些综合症的数量会随着季节的变化而变化,每年的变化方式也不尽相同。我们的目标是在发现季节性变化的数据中发现异常计数的情况下,评估不一致的季节性影响对绩效评估的影响(假阳性率和真实阳性率)。方法为了评估不一致的季节影响的影响,我们将合成暴发注入到真实数据中,并从两个模型中模拟出的拟合到相同真实数据的数据中注入。使用在2/1 / 94–5 / 31/03的急诊科中收集的实际呼吸综合征计数,我们将培训数据的长度从一年更改为八年,并对八个预测中的每一个产生的预测误差进行了顺序检验方法,并根据1000次注入的合成暴发评估了它们的检测概率(DP)。对于两个相应的模拟数据集,我们都进行了相同的操作。不太现实的非层次模型的模拟数据集假设“一个季节适合所有人”,这意味着每年的季节高峰具有相同的发作,持续时间和强度。更现实的模拟数据集使用分层模型来捕获违反“一个季节适合所有人”的假设。结果本实验表明,当使用非分层模型模拟的数据进行DP估计时,某些方法的DP估计存在乐观偏差,因此表明至少对于某些真实数据集和方法,不足以假设“一个季节适合所有人。”结论对于我们分析的数据,违反了“一个季节适合所有人”的假设,对于所考虑的预测方法(基于移动平均法),基于模拟数据(假设“一个季节适合所有人”)的DP绩效主张倾向于乐观的基于相对较少数量的训练数据的移动平均值方法在所有三个数据集上都具有竞争力,但是在真实数据和分层模型中的数据上则更具竞争力,这是两个违反“一个季节适合所有人”的数据集假设。

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