首页> 外文期刊>British Biotechnology Journal >Domain Analysis and Isolation of ConiferylAlcohol Dehydrogenase Gene fromPseudomonas nitroreducens Jin1
【24h】

Domain Analysis and Isolation of ConiferylAlcohol Dehydrogenase Gene fromPseudomonas nitroreducens Jin1

机译:硝酸假单胞菌Jin1针叶树醇脱氢酶基因的结构域分析与分离

获取原文
           

摘要

Aim: The Aim of present study is to analyse conserved functional Short Dehydrogenase Reductase (SDR) domain from bacteria. Based on the domain analysis selection of coniferyl alcohol dehydrogenase gene for isolation from Pseudomonas nitroreducens Jin1.Place and Duration of Study: Department of Biotechnology, Punjabi University, Patiala. From July, 2012 to November, 2012.Methodology: Bioinformatics tools were used to analyse various calA genes from bacteria based on the presence of conserved domain in members of SDR family. Based on insilico analysis, Pseudomonas nitroreducens Jin1 calA was selected. PCR was used for amplification of the gene from the genome of Pseudomonas nitroreducens Jin1. Result: Multiple sequence alignment results for conserved domains amongst members of SDR family identified presence of all domains of Short Dehydrogenase Reductase members in Pseudomonas nitroreducens Jin1 calA gene. Amongst the various sequences compared the P. nitroreducens Jin1, calA was found to be the smallest in size. The locus of calA in the genome resides at 103513-104280 bases. It was amplified from the genome of Pseudomonas nitroreducens Jin1. The calA gene that was amplified is of size 768bp. Conclusion: calA gene isolated from Pseudomonas nitroreducens Jin1 is a small gene with all the functional domains and can be used for biotransformation of coniferyl alcohol to coniferyl aldehyde.
机译:目的:本研究的目的是分析细菌中保守的功能性短脱氢酶还原酶(SDR)结构域。基于结构域分析,选择了从硝酸假单胞菌中分离得到的松柏醇脱氢酶基因。研究地点和持续时间:旁遮普大学生物技术系,帕蒂亚拉。 2012年7月至2012年11月。方法:根据SDR家族成员中保守域的存在,使用生物信息学工具分析细菌中的各种calA基因。根据计算机分析,选择了硝酸假单胞菌Jin1 calA。 PCR用于从硝酸假单胞菌Jin1的基因组中扩增该基因。结果:SDR家族成员之间的保守域的多个序列比对结果确定了硝化假单胞菌Jin1 calA基因中短脱氢酶还原酶成员的所有域的存在。在比较的各种序列中,硝化疟原虫Jin1中,发现calA的大小最小。基因组中的calA基因座位于103513-104280个碱基。它是从硝酸假单胞菌Jin1的基因组中扩增得到的。扩增的calA基因大小为768bp。结论:硝酸假单胞菌Jin1分离得到的calA基因是一个具有所有功能域的小基因,可用于从松柏醇向松柏醛的生物转化。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号