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Mutation analysis of 272 Spanish families affected by autosomal recessive retinitis pigmentosa using a genotyping microarray

机译:应用基因分型芯片对272例常染色体隐性遗传性视网膜炎的西班牙家庭进行突变分析

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Purpose: Retinitis pigmentosa (RP) is agenetically heterogeneous disorder characterized by progressive loss ofvision. The aim of this study was to identify the causative mutationsin 272 Spanish families using a genotyping microarray. Methods: 272 unrelated Spanish families,107 with autosomal recessive RP (arRP) and 165 with sporadic RP (sRP),were studied using the APEX genotyping microarray. The families werealso classified by clinical criteria: 86 juveniles and 186 typical RPfamilies. Haplotype and sequence analysis were performed to identifythe second mutated allele. Results: At least one-gene variant wasfound in 14% and 16% of the juvenile and typical RP groupsrespectively. Further study identified four new mutations, providingboth causative changes in 11% of the families. Retinol Dehydrogenase 12(RDH12) was the most frequently mutated gene in the juvenile RPgroup, and Usher Syndrome 2A (USH2A) and Ceramide Kinase-Like (CERKL)werethemostfrequentlymutatedgenesinthetypicalRPgroup.Theonlyvariant found in CERKL was p.Arg257Stop, the most frequentmutation. Conclusions: The genotyping microarraycombined with segregation and sequence analysis allowed us to identifythe causative mutations in 11% of the families. Due to the low numberof characterized families, this approach should be used in tandem withother techniques.
机译:目的:色素性视网膜炎(RP)是年龄异质性疾病,其特征是进行性视力丧失。这项研究的目的是使用基因分型微阵列鉴定272个西班牙家庭中的致病性突变。方法:使用APEX基因分型芯片研究了272个无关的西班牙家庭,107个常染色体隐性RP(arRP)和165个散发RP(sRP)。还按照临床标准对这些家庭进行了分类:86个少年和186个典型的RP家庭。进行单倍型和序列分析以鉴定第二个突变的等位基因。结果:分别在青少年和典型RP组中分别发现14%和16%的至少一种基因变异。进一步的研究确定了四个新的突变,在11%的家庭中都提供了致病性变化。视黄醇脱氢酶12(RDH12)是青少年RP组中最常见的突变基因,而Usher综合征2A(USH2A)和神经酰胺激酶样(CERKL)则是典型RP组中最常见的突变基因。结论:基因分型微阵列与分离和序列分析相结合,使我们能够鉴定11%的家庭中的致病性突变。由于特征族的数量少,因此该方法应与其他技术结合使用。

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