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Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE)

机译:生物学网络计算模型(COMBINE)第一次会议的会议报告

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The Computational Modeling in Biology Network (COMBINE), is an initiative to coordinate the development of the various community standards and formats in computational systems biology and related fields. This report summarizes the activities pursued at the first annual COMBINE meeting held in Edinburgh on October 6-9 2010 and the first HARMONY hackathon, held in New York on April 18-22 2011. The first of those meetings hosted 81 attendees. Discussions covered both official COMBINE standards-(BioPAX, SBGN and SBML), as well as emerging efforts and interoperability between different formats. The second meeting, oriented towards software developers, welcomed 59 participants and witnessed many technical discussions, development of improved standards support in community software systems and conversion between the standards. Both meetings were resounding successes and showed that the field is now mature enough to develop representation formats and related standards in a coordinated manner.
机译:生物学网络中的计算建模(COMBINE)是一项旨在协调计算系统生物学及相关领域中各种社区标准和格式的开发的计划。本报告总结了2010年10月6日至9日在爱丁堡举行的第一届COMBINE年度会议以及2011年4月18日至22日在纽约举行的第一届HARMONY hackathon上进行的活动。这些会议中的第一场有81位与会者。讨论涵盖了官方COMBINE标准(BioPAX,SBGN和SBML),以及新兴的努力和不同格式之间的互操作性。针对软件开发人员的第二次会议欢迎了59位参与者,并见证了许多技术讨论,开发了社区软件系统中改进的标准支持以及标准之间的转换。两次会议都取得了巨大的成功,表明该领域现在已经足够成熟,可以以协调的方式制定代表格式和相关标准。

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