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首页> 外文期刊>Standards in Genomic Sciences >Draft genome sequence for virulent and avirulent strains of Xanthomonas arboricola isolated from Prunus spp. in Spain
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Draft genome sequence for virulent and avirulent strains of Xanthomonas arboricola isolated from Prunus spp. in Spain

机译：从李子李中分离到的强毒和无毒黄单胞菌菌株的基因组序列草案。在西班牙

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摘要

Xanthomonas arboricola is a species in genus Xanthomonas which is mainly comprised of plant pathogens. Among the members of this taxon, X. arboricola pv. pruni, the causal agent of bacterial spot disease of stone fruits and almond, is distributed worldwide although it is considered a quarantine pathogen in the European Union. Herein, we report the draft genome sequence, the classification, the annotation and the sequence analyses of a virulent strain, IVIA 2626.1, and an avirulent strain, CITA 44, of X. arboricola associated with Prunus spp. The draft genome sequence of IVIA 2626.1 consists of 5,027,671?bp, 4,720 protein coding genes and 50 RNA encoding genes. The draft genome sequence of strain CITA 44 consists of 4,760,482?bp, 4,250 protein coding genes and 56 RNA coding genes. Initial comparative analyses reveals differences in the presence of structural and regulatory components of the type IV pilus, the type III secretion system, the type III effectors as well as variations in the number of the type IV secretion systems. The genome sequence data for these strains will facilitate the development of molecular diagnostics protocols that differentiate virulent and avirulent strains. In addition, comparative genome analysis will provide insights into the plant-pathogen interaction during the bacterial spot disease process.
机译：Xanthomonas arboricola是Xanthomonas属的一个物种，主要由植物病原体组成。在此分类单元的成员中，X。arboricola pv。 pruni是核果类和杏仁类细菌斑病的病原体，尽管在欧盟被认为是检疫病原体，但仍在全球范围内传播。在这里，我们报告了与李氏葡萄球菌相关的强毒株IVIA 2626.1和无毒株CITA 44的基因组序列草案，分类，注释和序列分析。 IVIA 2626.1的基因组序列草案由5,027,671？bp，4720个蛋白质编码基因和50个RNA编码基因组成。 CITA 44菌株的基因组序列草案由4,760,482？bp，4,250个蛋白质编码基因和56个RNA编码基因组成。初步的比较分析揭示了IV型菌毛，III型分泌系统，III型效应子以及IV型分泌系统数量的变化在结构和调节成分上的差异。这些菌株的基因组序列数据将促进分子诊断方案的发展，该方案可区分有毒和无毒菌株。另外，比较基因组分析将提供细菌斑病过程中植物与病原体相互作用的见解。

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