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首页> 外文期刊>Standards in Genomic Sciences >Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost
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Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost

机译：Geobacillus sp。的完整基因组序列。 WCH70，一种从木材堆肥中分离出来的嗜热菌株

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摘要

Geobacillus sp. WCH70 was one of several thermophilic organisms isolated from hot composts in the Middleton, WI area. Comparison of 16?S rRNA sequences showed the strain may be a new species, and is most closely related to G. galactosidasius and G. toebii . The genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute and deposited at the NCBI in December 2009 (CP001638). The genome of Geobacillus species WCH70 consists of one circular chromosome of 3,893,306?bp with an average G?+?C content of 43?%, and two circular plasmids of 33,899 and 10,287?bp with an average G?+?C content of 40?%. Among sequenced organisms, Geobacillus sp. WCH70 shares highest Average Nucleotide Identity (86?%) with G. thermoglucosidasius strains, as well as similar genome organization. Geobacillus sp. WCH70 appears to be a highly adaptable organism, with an exceptionally high 125 annotated transposons in the genome. The organism also possesses four predicted restriction-modification systems not found in other Geobacillus species.
机译：芽孢杆菌WCH70是从威斯康星州Middleton的热堆肥中分离出来的几种嗜热生物之一。对16S rRNA序列的比较表明，该菌株可能是一个新种，并且与半乳糖假单胞菌和toebii假单胞菌关系最密切。由美国能源部联合基因组研究所对基因组进行测序，组装和注释，并于2009年12月保藏在NCBI（CP001638）。地芽孢杆菌属物种WCH70的基因组由一个3,893,306？bp的环状染色体组成，平均Gδ+ΔC含量为43％，以及两个33,899和10,287？bp的环状质粒，平均Gδ+ΔC含量为40。 ％。在测序的生物中，Geobacillus sp.。 WCH70与热葡糖假单胞菌菌株以及类似的基因组组织具有最高的平均核苷酸同一性（86％）。芽孢杆菌WCH70似乎是一种高度适应的生物，在基因组中具有异常高的125个带注释的转座子。该生物还拥有其他地理杆菌属物种中未发现的四个预测的限制性修饰系统。

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