High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India

Supratim Mukherjee; Alla Lapidus; Nicole Shapiro; Jan-Fang Cheng; James Han; TBK Reddy; Marcel Huntemann; Natalia Ivanova; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Stefan Spring; Markus G?ker; Victor Markowitz; Tanja Woyke; Brian J Tindall; Hans-Peter Klenk; Nikos C Kyrpides; Amrita Pati

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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India

机译：从印度昌迪加尔市的排水系统的泥泞水体中分离出的玫瑰基因型菌株SRC-1T（DSM 17521T）的高质量基因组序列和分析

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Pontibacter roseus is a member of genus Pontibacter family Cytophagaceae, class Cytophagia. While the type species of the genus Pontibacter actiniarum was isolated in 2005 from a marine environment, subsequent species of the same genus have been found in different types of habitats ranging from seawater, sediment, desert soil, rhizosphere, contaminated sites, solar saltern and muddy water. Here we describe the features of Pontibacter roseus strain SRC-1supT/sup along with its complete genome sequence and annotation from a culture of DSM 17521supT/sup. The 4,581,480?bp long draft genome consists of 12 scaffolds with 4,003 protein-coding and 50 RNA genes and is a part of Genomic Encyclopedia of Type Strains: KMG-I project.

机译：玫瑰糖杆菌是细胞噬菌体类Pontibacter家族的一员。 2005年，从海洋环境中分离出了放线菌属的一类物种，但随后又在海水，沉积物，沙漠土壤，根际，受污染的地点，日照盐湖和泥泞的不同类型的栖息地中发现了该属的后续物种。水。在这里，我们描述玫瑰弧菌菌株SRC-1 T 的特征，以及其完整的基因组序列和DSM 17521 T 培养物中的注释。 4,581,480？bp长的草案基因组由12个具有4,003个蛋白质编码的支架和50个RNA基因组成，并且是《类型菌株基因组百科全书：KMG-I项目》的一部分。

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《Standards in Genomic Sciences》 |2015年第1期|共页
作者
Supratim Mukherjee; Alla Lapidus; Nicole Shapiro; Jan-Fang Cheng; James Han; TBK Reddy; Marcel Huntemann; Natalia Ivanova; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Stefan Spring; Markus G?ker; Victor Markowitz; Tanja Woyke; Brian J Tindall; Hans-Peter Klenk; Nikos C Kyrpides; Amrita Pati;
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中图分类遗传学;
关键词
AerobicGram-negativeNon-motileObligate aerobeHalotolerantMenaquinoneGEBAKMG-I;

机译：好氧革兰氏阴性非运动性专性需氧菌盐耐甲萘醌GEBAKMG-I;

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5. High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh India [O] . Supratim Mukherjee, Alla Lapidus, Nicole Shapiro, 2015

机译：从印度昌迪加尔市排水系统的泥水中分离出的玫瑰糖型菌株SRC-1T（DSM 17521T）的高质量草图基因组序列和分析
6. High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India [O] . Supratim Mukherjee, Alla Lapidus, Nicole Shapiro, 2015

机译：从印度昌迪加尔市排水系统的泥水中分离出的玫瑰糖型菌株SRC-1T（DSM 17521T）的高质量草图基因组序列和分析

High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India

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