On the Informativeness of Dominant and Co-Dominant Genetic Markers for Bayesian Supervised Clustering

Gilles Guillot; Alexandra Carpentier-Skandalis

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On the Informativeness of Dominant and Co-Dominant Genetic Markers for Bayesian Supervised Clustering

机译：贝叶斯监督聚类的显性和共性遗传标记的信息性

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We study the accuracy of a Bayesian supervised method used to cluster individuals into geneticallyhomogeneous groups on the basis of dominant or codominant molecular markers. We provide a formula relating an errorcriterion to the number of loci used and the number of clusters. This formula is exact and holds for arbitrary number ofclusters and markers. Our work suggests that dominant markers studies can achieve an accuracy similar to that ofcodominant markers studies if the number of markers used in the former is about 1.7 times larger than in the latter.

机译：我们研究了一种基于贝叶斯监督方法的准确性，该方法用于根据显性或共性分子标记将个体聚类为遗传同质的群体。我们提供了一个公式，该公式将错误判据与所使用的基因座数量和簇数量相关联。该公式是精确的，适用于任意数量的簇和标记。我们的工作表明，如果前者中使用的标记数是后者的1.7倍左右，那么显性标记研究可以达到与共性标记研究相似的准确性。

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《The Open Statistics & Probability Journal》 |2017年第1期|共6页
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Gilles Guillot; Alexandra Carpentier-Skandalis;
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1. Development of a locus-specific, co-dominant SCAR marker for assisted-selection of the Sw-5 (Tospovirus resistance) gene cluster in a wide range of tomato accessions [J] . Dianese crico C., de Fonseca Maria Esther N., Goldbach Rob, Molecular Breeding . 2010,第1期

机译：特定于位点的，共同主导的SCAR标记的开发，可在广泛的番茄品种中辅助选择Sw-5（弓形病毒抗性）基因簇
2. Bayesian inference of species hybrids using multilocus dominant genetic markers [J] . Eric C Anderson* Philosophical Transactions B: Biological Sciences . 2008,第1505期

机译：利用多基因座遗传标记对物种杂种进行贝叶斯推断
3. Bayesian inference of species hybrids using multilocus dominant genetic markers [J] . Eric C. Anderson Philosophical Transactions of the Royal Society of London, Series B. Biological Sciences . 2008,第1505期

机译：利用多基因座显性遗传标记的物种杂种贝叶斯推断
4. Selection of a core set of informative gene-derived SSR and SNP markers for assaying the genetic variation in germplasm collections of barley for abiotic stress tolerance [C] . Rajeev K. Varshney, Thomas Thiel, Jan Valkoun, European Association for Research on Plant Breeding General Congress . 2004

机译：选择核心信息基因衍生的SSR和SNP标记的核心集，用于测定大麦种质收集的遗传变异以进行非生物胁迫耐受性
5. The mitochondrial genome of the blue crab (Callinectes sapidus), an informative genetic marker for the evolutionary biology and population genetics of the species. [D] . Feng, Xiaojun. 2009

机译：蓝蟹（Callinectes sapidus）的线粒体基因组，是该物种进化生物学和种群遗传学的信息性遗传标记。
6. Bayesian inference of species hybrids using multilocus dominant genetic markers [O] . Eric C Anderson 2008

机译：利用多基因座遗传标记对物种杂种进行贝叶斯推断
7. On the Informativeness of Dominant and Co-Dominant Genetic Markers for Bayesian Supervised Clustering [O] . Guillot, Gilles, Carpentier-Skandalis, Alexandra 2011

机译：贝叶斯监督聚类的显性和共显性遗传标记的信息性
8. Bayesian Cross-Validation Approach to Evaluate Genetic Baselines and Forecast the Necessary Number of Informative Single Nucleotide Polymorphisms. [R] . Garvin, M. R., Masuda, M. M., Pella, J. J., 2014

机译：贝叶斯交叉验证方法评估遗传基线和预测必要数量的信息单核苷酸多态性。

On the Informativeness of Dominant and Co-Dominant Genetic Markers for Bayesian Supervised Clustering

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