Data mining using the Catalogue of Somatic Mutations in Cancer BioMart

Adam P. Butler; Andrew Menzies; Chai Yin Kok; Charlotte G. Cole; David Beare; Jon W. Teague; Kenric Leung; Michael R. Stratton; Mingming Jia; Nidhi Bindal; P. Andrew Futreal; Peter J. Campbell; Prasad Gunasekaran; Rebecca Shepherd; S. Bamford; Sari Ward; Simon A. Forbes

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Data mining using the Catalogue of Somatic Mutations in Cancer BioMart

机译：使用Cancer BioMart中的体细胞突变目录进行数据挖掘

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Catalogue of Somatic Mutations in Cancer (COSMIC) (http://www.sanger.ac.uk/cosmic) is a publicly available resource providing information on somatic mutations implicated in human cancer. Release v51 (January 2011) includes data from just over 19?000 genes, 161?787 coding mutations and 5573 gene fusions, described in more than 577?000 tumour samples. COSMICMart (COSMIC BioMart) provides a flexible way to mine these data and combine somatic mutations with other biological relevant data sets. This article describes the data available in COSMIC along with examples of how to successfully mine and integrate data sets using COSMICMart. Database URL: http://www.sanger.ac.uk/genetics/CGP/cosmic/biomart/martview/

机译：癌症中的体细胞突变目录（COSMIC）（http://www.sanger.ac.uk/cosmic）是可公开获得的资源，提供了与人类癌症有关的体细胞突变的信息。 v51版（2011年1月）包括来自577多个肿瘤样本中的190，000个基因，161到787个编码突变和5573个基因融合的数据。 COSMICMart（COSMIC BioMart）提供了一种灵活的方式来挖掘这些数据，并将体细胞突变与其他生物学相关的数据集结合起来。本文介绍了COSMIC中可用的数据，以及如何使用COSMICMart成功挖掘和集成数据集的示例。数据库网址：http://www.sanger.ac.uk/genetics/CGP/cosmic/biomart/martview/

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《Database》 |2011年第2012期|共页
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Adam P. Butler; Andrew Menzies; Chai Yin Kok; Charlotte G. Cole; David Beare; Jon W. Teague; Kenric Leung; Michael R. Stratton; Mingming Jia; Nidhi Bindal; P. Andrew Futreal; Peter J. Campbell; Prasad Gunasekaran; Rebecca Shepherd; S. Bamford; Sari Ward; Simon A. Forbes;
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1. COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer [J] . Andrew Menzies, Chai Yin Kok, Charlotte Cole, Nucleic acids research . 2011,第suppla1期

机译：COSMIC：在癌症的体细胞突变目录中挖掘完整的癌症基因组
2. Critical amino acid residues in proteins: a BioMart integration of Reactome protein annotations with PRIDE mass spectrometry data and COSMIC somatic mutations [J] . David Croft, David Ovelleiro, Henning Hermjakob, Database . 2011,第3期

机译：蛋白质中的关键氨基酸残基：Reactome蛋白质注释与PRIDE质谱数据和COSMIC体细胞突变的BioMart集成
3. The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website [J] . S Bamford, E Dawson, S Forbes, British Journal of Cancer . 2004,第2期

机译：COSMIC（癌症中的体细胞突变目录）数据库和网站
4. PAS-MUT with Somatic Mutations in Cancer and Classified Diseases for Clinical-Genomics Research: PAS-MUT Somatic Mutations [C] . Saman Zeeshan, Zeeshan Ahmed IEEE International Conference on Bioinformatics and Biomedicine . 2019

机译：具有癌症和分类疾病中的体细胞突变的PAS-MUT用于临床基因组学研究：PAS-MUT和体细胞突变
5. Computational assessment of somatic missense mutations detected in tumor sequencing studies with cancer-specific high-throughput annotation of somatic mutations (CHASM). [D] . Carter, Hannah. 2012

机译：具有肿瘤特异性高通量体细胞突变（CHASM）的肿瘤测序研究中检测到的体细胞错义突变的计算评估。
6. Data mining using the Catalogue of Somatic Mutations in Cancer BioMart [O] . Rebecca Shepherd, Simon A. Forbes, David Beare, 2011

机译：使用Cancer BioMart中的体细胞突变目录进行数据挖掘
7. Data mining using the Catalogue of Somatic Mutations in Cancer BioMart [O] . Shepherd, Rebecca, Forbes, Simon A., Beare, David, 2011

机译：使用Cancer BioMart中的体细胞突变目录进行数据挖掘

Data mining using the Catalogue of Somatic Mutations in Cancer BioMart

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