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A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki

机译:社区管理的共识注释会不断更新:枯草芽孢杆菌为中心的维基SubtiWiki

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Bacillus subtilis is the model organism for Gram-positive bacteria, with a large amount of publications on all aspects of its biology. To facilitate genome annotation and the collection of comprehensive information on B. subtilis, we created SubtiWiki as a community-oriented annotation tool for information retrieval and continuous maintenance. The wiki is focused on the needs and requirements of scientists doing experimental work. This has implications for the design of the interface and for the layout of the individual pages. The pages can be accessed primarily by the gene designations. All pages have a similar flexible structure and provide links to related gene pages in SubtiWiki or to information in the World Wide Web. Each page gives comprehensive information on the gene, the encoded protein or RNA as well as information related to the current investigation of the gene/protein. The wiki has been seeded with information from key publications and from the most relevant general and B. subtilis-specific databases. We think that SubtiWiki might serve as an example for other scientific wikis that are devoted to the genes and proteins of one organism. Database URL: The wiki can be accessed at http://subtiwiki.uni-goettingen.de/
机译:枯草芽孢杆菌是革兰氏阳性细菌的典范生物,其生物学的各个方面都有大量出版物。为了促进基因组注释和枯草芽孢杆菌的全面信息的收集,我们创建了SubtiWiki,将其作为面向社区的注释工具,用于信息检索和持续维护。 Wiki专注于从事实验工作的科学家的需求和要求。这对界面的设计和各个页面的布局都有影响。这些页面主要可以通过基因名称访问。所有页面都具有类似的灵活结构,并提供到SubtiWiki中相关基因页面或万维网上信息的链接。每页都提供有关基因,编码的蛋白质或RNA的全面信息,以及与基因/蛋白质当前研究有关的信息。 Wiki的种子信息来自主要出版物以及最相关的常规枯草芽孢杆菌数据库和特定于枯草芽孢杆菌的数据库。我们认为SubtiWiki可以作为其他专门针对一种生物的基因和蛋白质的科学Wiki的示例。数据库URL:可以在http://subtiwiki.uni-goettingen.de/上访问Wiki。

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