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Kin-Driver: a database of driver mutations in protein kinases

机译:Kin-Driver:蛋白激酶中驱动程序突变的数据库

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Somatic mutations in protein kinases (PKs) are frequent driver events in many human tumors, while germ-line mutations are associated with hereditary diseases. Here we present Kin-driver, the first database that compiles driver mutations in PKs with experimental evidence demonstrating their functional role. Kin-driver is a manual expert-curated database that pays special attention to activating mutations (AMs) and can serve as a validation set to develop new generation tools focused on the prediction of gain-of-function driver mutations. It also offers an easy and intuitive environment to facilitate the visualization and analysis of mutations in PKs. Because all mutations are mapped onto a multiple sequence alignment, analogue positions between kinases can be identified and tentative new mutations can be proposed for studying by transferring annotation. Finally, our database can also be of use to clinical and translational laboratories, helping them to identify uncommon AMs that can correlate with response to new antitumor drugs. The website was developed using PHP and JavaScript, which are supported by all major browsers; the database was built using MySQL server. Kin-driver is available at: http://kin-driver.leloir.org.ar/
机译:在许多人类肿瘤中,蛋白激酶(PKs)的体细胞突变是常见的驾驶员事件,而种系突变与遗传性疾病有关。在这里,我们介绍Kin-driver,这是第一个编译PK中驱动程序突变的数据库,并通过实验证据证明了它们的功能作用。 Kin-driver是一个由专家精心挑选的手动数据库,它特别关注激活突变(AM),并且可以用作验证集来开发专注于预测功能增益驱动程序突变的新一代工具。它还提供了一个简单直观的环境,以方便对PK中的突变进行可视化和分析。由于所有突变都被映射到多个序列比对上,因此可以识别激酶之间的类似位置,并可以通过转移注释来提出试验性的新突变。最后,我们的数据库也可用于临床和转化实验室,帮助他们识别出与新抗肿瘤药物反应相关的罕见AM。该网站是使用所有主要浏览器支持的PHP和JavaScript开发的;该数据库是使用MySQL服务器构建的。 Kin驱动程序可从以下网站获得:http://kin-driver.leloir.org.ar/

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