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BioC implementations in Go, Perl, Python and Ruby

机译:Go,Perl,Python和Ruby中的BioC实现

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As part of a communitywide effort for evaluating text mining and information extraction systems applied to the biomedical domain, BioC is focused on the goal of interoperability, currently a major barrier to wide-scale adoption of text mining tools. BioC is a simple XML format, specified by DTD, for exchanging data for biomedical natural language processing. With initial implementations in C++ and Java, BioC provides libraries of code for reading and writing BioC text documents and annotations. We extend BioC to Perl, Python, Go and Ruby. We used SWIG to extend the C++ implementation for Perl and one Python implementation. A second Python implementation and the Ruby implementation use native data structures and libraries. BioC is also implemented in the Google language Go. BioC modules are functional in all of these languages, which can facilitate text mining tasks. BioC implementations are freely available through the BioC site: http://bioc.sourceforge.net. Database URL: http://bioc.sourceforge.net/
机译:作为社区评估用于生物医学领域的文本挖掘和信息提取系统的工作的一部分,BioC专注于互操作性的目标,而互操作性目前是大规模采用文本挖掘工具的主要障碍。 BioC是DTD指定的一种简单XML格式,用于交换数据以进行生物医学自然语言处理。利用C ++和Java的初始实现,BioC提供了用于读写BioC文本文档和注释的代码库。我们将BioC扩展到Perl,Python,Go和Ruby。我们使用SWIG扩展了Perl的C ++实现和一个Python实现。第二个Python实现和Ruby实现使用本机数据结构和库。 BioC也以Google语言Go来实现。 BioC模块在所有这些语言中均可用,可以促进文本挖掘任务。可通过BioC网站免费获得BioC实施:http://bioc.sourceforge.net。数据库URL:http://bioc.sourceforge.net/

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