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Functional Screening of Metagenome and Genome Libraries for Detection of Novel Flavonoid-Modifying Enzymes

机译:用于检测新型类黄酮修饰酶的元基因组和基因组文库的功能筛选

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The functional detection of novel enzymes other than hydrolases from metagenomes is limited since only a very few reliable screening procedures are available that allow the rapid screening of large clone libraries. For the discovery of flavonoid-modifying enzymes in genome and metagenome clone libraries, we have developed a new screening system based on high-performance thin-layer chromatography (HPTLC). This metagenome extract thin-layer chromatography analysis (META) allows the rapid detection of glycosyltransferase (GT) and also other flavonoid-modifying activities. The developed screening method is highly sensitive, and an amount of 4 ng of modified flavonoid molecules can be detected. This novel technology was validated against a control library of 1,920 fosmid clones generated from a single Bacillus cereus isolate and then used to analyze more than 38,000 clones derived from two different metagenomic preparations. Thereby we identified two novel UDP glycosyltransferase (UGT) genes. The metagenome-derived gtfC gene encoded a 52-kDa protein, and the deduced amino acid sequence was weakly similar to sequences of putative UGTs from Fibrisoma and Dyadobacter . GtfC mediated the transfer of different hexose moieties and exhibited high activities on flavones, flavonols, flavanones, and stilbenes and also accepted isoflavones and chalcones. From the control library we identified a novel macroside glycosyltransferase (MGT) with a calculated molecular mass of 46 kDa. The deduced amino acid sequence was highly similar to sequences of MGTs from Bacillus thuringiensis . Recombinant MgtB transferred the sugar residue from UDP-glucose effectively to flavones, flavonols, isoflavones, and flavanones. Moreover, MgtB exhibited high activity on larger flavonoid molecules such as tiliroside.
机译:由于来自元基因组的水解酶以外的新型酶的功能检测受到限制,因为只有极少数可靠的筛选程序可用于快速筛选大型克隆文库。为了在基因组和元基因组克隆文库中发现类黄酮修饰酶,我们开发了一种基于高效薄层色谱(HPTLC)的新型筛选系统。这种超基因组提取物薄层色谱分析(META)可快速检测糖基转移酶(GT)以及其他类黄酮修饰活性。发达的筛选方法高度敏感,可以检测到4 ng的修饰类黄酮分子。这项新技术针对由蜡样芽胞杆菌分离物产生的1,920个fosmid克隆的对照文库进行了验证,然后用于分析来自两种不同宏基因组制剂的38,000多个克隆。因此,我们确定了两个新的UDP糖基转移酶(UGT)基因。源自元基因组的gtfC基因编码一个52 kDa的蛋白质,推导的氨基酸序列与纤维瘤和Dyadobacter推定的UGT序列微弱相似。 GtfC介导了不同己糖部分的转移,并且对黄酮,黄酮醇,黄烷酮和丁苯二酚以及异黄酮和查耳酮显示出高活性。从对照库中,我们确定了一种新型的大分子糖基转移酶(MGT),其分子质量为46 kDa。推导的氨基酸序列与苏云金芽孢杆菌MGTs序列高度相似。重组MgtB有效地将UDP-葡萄糖中的糖残基转移至黄酮,黄酮醇,异黄酮和黄烷酮。此外,MgtB对较大的类黄酮分子(如罗罗苷)表现出高活性。

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