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High-throughput metabolic profiling, combined with chemometrics and bioinformatic analysis reveals functional alterations in myocardial dysfunction

机译:高通量代谢谱分析,结合化学计量学和生物信息学分析,揭示了心肌功能障碍的功能改变

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High-throughput metabolic profiling technology has been used for biomarker discovery and to reveal underlying metabolic mechanisms. Sepsis-induced myocardial dysfunction (SMD) is a common complication in sepsis patients, and severely affects their quality of life. However, the pathogenesis of SMD is currently unclear, and there has been inadequate basic research. In this study, metabolic profiling was explored by liquid chromatography/mass spectrometry (LC/MS) combined with chemometrics and bioinformatic analysis. The global metabolome data were analyzed using chemometrics analysis including principal component analysis and partial least squares discriminant analysis for significant metabolites. Variable importance for projection values obtained utilizing a pattern recognition method were used to identify potential biomarkers. The differential metabolites were putatively identified using the metabolome database and bioinformatics analysis was conducted via Ingenuity Pathway Analysis (IPA) to predict the likely functional alterations. In total, 21 differential metabolites were found in SMD and these were involved in phenylalanine, tyrosine and tryptophan biosynthesis, arachidonic acid metabolism, glycine, serine and threonine metabolism, and so on. The analysis revealed that the metabolites were strongly related to molecular transport, and small molecule biochemistry metabolic pathways. The present study indicates that high-throughput metabolic profiling, combined with chemometrics and a bioinformatic platform, can reveal the likely functional alterations in disease and could provide more precise and credible information in the basic research of disease pathogenesis.
机译:高通量代谢谱分析技术已用于生物标记物发现和揭示潜在的代谢机制。脓毒症诱发的心肌功能障碍(SMD)是脓毒症患者的常见并发症,严重影响其生活质量。然而,目前尚不清楚SMD的发病机理,并且基础研究不足。在这项研究中,通过液相色谱/质谱(LC / MS)结合化学计量学和生物信息学分析来探索代谢谱。使用化学计量学分析(包括主要成分分析和偏最小二乘判别分析)的重要代谢物分析了全局代谢组数据。利用模式识别方法获得的投影值的可变重要性被用于识别潜在的生物标记。假定使用代谢组数据库鉴定出不同的代谢产物,并通过“机能途径分析”(IPA)进行生物信息学分析,以预测可能的功能改变。总共在SMD中发现21种差异代谢物,这些代谢物涉及苯丙氨酸,酪氨酸和色氨酸的生物合成,花生四烯酸代谢,甘氨酸,丝氨酸和苏氨酸代谢等。分析表明,代谢物与分子运输和小分子生物化学代谢途径密切相关。本研究表明,高通量代谢谱分析,结合化学计量学和生物信息学平台,可以揭示疾病中可能的功能改变,并可以在疾病发病机理的基础研究中提供更准确和可靠的信息。

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