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首页> 外文期刊>The biochemical journal >The oxyanion hole of Pseudomonas fluorescens mannitol 2-dehydrogenase: a novel structural motif for electrostatic stabilization in alcohol dehydrogenase active sites
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The oxyanion hole of Pseudomonas fluorescens mannitol 2-dehydrogenase: a novel structural motif for electrostatic stabilization in alcohol dehydrogenase active sites

机译:荧光假单胞菌甘露醇2-脱氢酶的氧阴离子孔:酒精脱氢酶活性位点中静电稳定的新型结构基序

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pThe side chains of Asnsup191/sup and Asnsup300/sup constitute a characteristic structural motif of the active site of iPseudomonas fluorescens/i mannitol 2-dehydrogenase that lacks precedent in known alcohol dehydrogenases and resembles the canonical oxyanion binding pocket of serine proteases. We have used steady-state and transient kinetic studies of the effects of varied pH and deuterium isotopic substitutions in substrates and solvent on the enzymatic rates to delineate catalytic consequences resulting from individual and combined replacements of the two asparagine residues by alanine. The rate constants for the overall hydride transfer to and from C-2 of mannitol, which were estimated as ~ 5×10sup2/sup ssup?1/sup and ~ 1.5×10sup3/sup ssup?1/sup in the wild-type enzyme respectively, were selectively slowed, between 540- and 2700-fold, in single-site mannitol 2-dehydrogenase mutants. These effects were additive in the corresponding doubly mutated enzyme, suggesting independent functioning of the two asparagine residues in catalysis. Partial disruption of the oxyanion hole in single-site mutants caused an upshift, by ≥1.2 pH units, in the kinetic piK/i of the catalytic acid-base Lyssup295/sup in the enzyme–NADsup+/sup–mannitol complex. The oxyanion hole of mannitol 2-dehydrogenase is suggested to drive a precatalytic conformational equilibrium at the ternary complex level in which the reactive group of the substrate is ‘activated’ for chemical conversion through its precise alignment with the unprotonated side chain of Lyssup295/sup (mannitol oxidation) and C=O bond polarization by the carboxamide moieties of Asnsup191/sup and Asnsup300/sup (fructose reduction). In the subsequent hydride transfer step, the two asparagine residues provide ~ 40 kJ/mol of electrostatic stabilization./p
机译:> Asn 191 和Asn 300 的侧链构成了荧光假单胞菌甘露醇2-脱氢酶活性位点的特征结构基序,在已知的醇脱氢酶中缺乏先例,并且类似于丝氨酸蛋白酶的经典氧阴离子结合口袋。我们已经使用稳态和瞬态动力学研究,研究了底物和溶剂中不同pH和氘同位素取代对酶促速率的影响,以描绘由丙氨酸单独和联合取代两个天冬酰胺残基而导致的催化后果。氢化物与甘露糖醇的C-2转移的总速率常数约为〜5×10 2 s ?1 和〜1.5在单点甘露醇2-脱氢酶突变体中,野生型酶中的×10 3 s ?1 分别有选择地减慢,在540到2700倍之间。这些作用在相应的双突变酶中是加和的,表明两个天冬酰胺残基在催化中具有独立的功能。单位点突变体中氧阴离子孔的部分破坏引起了≥1.2pH单位的上调,其中催化酸碱Lys 295 的动力学p K 。酶–NAD + -甘露醇复合物。建议甘露醇2-脱氢酶的氧阴离子孔在三元络合物水平上驱动催化前构象平衡,其中底物的反应性基团通过与Lys的未质子化侧链精确对齐而被“活化”以进行化学转化。 295 (甘露醇氧化)和Asn 191 和Asn 300 的羧酰胺部分使C = O键极化(果糖还原)。在随后的氢化物转移步骤中,两个天冬酰胺残基可提供约40 kJ / mol的静电稳定作用。

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