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One-Tube Nested Real-Time PCR Assay for Rapid Screening of Porcine Cytomegalovirus in Clinical Samples

机译:单管嵌套实时PCR测定,用于快速筛选临床样品中的猪细胞病毒

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Porcine cytomegalovirus (PCMV) is a pathogen that must be removed from pigs for use as organ donors in xenotransplantation. Recently, it has been found that when donor pigs are infected with PCMV, a pig-to-non-human-primate xenotransplantation lower transplant survival by 2 to 3 times. Therefore, highly sensitive methods are needed to maintain designated pathogen free (DPF) pig and screen for xenografts. The purpose of this study was to evaluate the performance of commercially available method with one-tube nested real-time PCR assay to quickly detect PCMV infection in clinical samples and compare the results with those of sequence analysis. Molecular diagnostic methods were used to evaluate 127 samples, including tissues and blood samples from pigs suspected of PCMV infection. The detection rate for positive PCMV was 38.6% (n=49), 23.6% (n=30), and 12.6% (n=16) in one-tube nested real-time PCR, nested PCR, and conventional PCR methods, respectively. All PCMV-positive samples in conventional PCR or nested PCR methods were also positive in the one-tube nested real-time PCR assay. All the PCR products in the three methods were checked for amplification of PCMV gene by PCR and subsequent direct sequencing. The results of one-tube nested real-time PCR were found to be consistent with those of sequence analysis for all the samples and showed good agreement (κ=1). Our study found that the one-tube nested real-time PCR assay is more sensitive than the other two methods. This assay required approximately 1.5 hours for completion. Therefore, we concluded that one-tube nested real-time PCR assay is a fast and reliable method for the characterizing pathogen responsible for PCMV infection.
机译:猪Cytomegalovirus(PCMV)是一种病原体,必须从猪从猪中取出,以用作卵黄素的器官供体。最近,已经发现,当供体猪被PCMV感染时,猪对非人类激发卵外膜持续的移植存活率将较低2至3次。因此,需要高敏感的方法来维持指定病原体(DPF)猪和异种移植物的筛选。本研究的目的是评估商业上可获得的方法的性能与单管嵌套实时PCR测定以在临床样品中快速检测PCMV感染,并将结果与​​序列分析的结果进行比较。用于评估127个样品的分子诊断方法,包括来自怀疑PCMV感染的猪的组织和血液样本。阳性PCMV的检出率为38.6%(n = 49),23.6%(n = 30),单管嵌套实时PCR,巢式PCR和常规PCR方法分别为12.6%(n = 16) 。常规PCR或巢式PCR方法中的所有PCMV阳性样品也在单管嵌套实时PCR测定中也为正。检查了三种方法中的所有PCR产物通过PCR和随后的直接测序扩增PCMV基因。发现单管嵌套实时PCR的结果与所有样品的序列分析结果一致,并显示出良好的协议(κ= 1)。我们的研究发现,单管嵌套实时PCR测定比其他两种方法更敏感。该测定需要约1.5小时完成。因此,我们得出结论,单管嵌套实时PCR测定是一种快速可靠的方法,用于表征负责PCMV感染的病原体。

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