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The Epidemiological Framework for Biological Invasions (EFBI): an interdisciplinary foundation for the assessment of biosecurity threats

机译:生物侵犯的流行病学框架(EFBI):评估生物安全威胁的跨学科基础

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Emerging microparasite (e.g. viruses, bacteria, protozoa and fungi) epidemics and the introduction of non-native pests and weeds are major biosecurity threats worldwide. The likelihood of these threats is often estimated from probabilities of their entry, establishment, spread and ease of prevention. If ecosystems are considered equivalent to hosts, then compartment disease models should provide a useful framework for understanding the processes that underpin non-native species invasions. To enable greater cross-fertilisation between these two disciplines, the Epidemiological Framework for Biological Invasions (EFBI) is developed that classifies ecosystems in relation to their invasion status: Susceptible, Exposed, Infectious and Resistant. These states are linked by transitions relating to transmission, latency and recovery. This viewpoint differs markedly from the species-centric approaches often applied to non-native species. It allows generalisations from epidemiology, such as the force of infection, the basic reproductive ratio R0, super-spreaders, herd immunity, cordon sanitaire and ring vaccination, to be discussed in the novel context of non-native species and helps identify important gaps in the study of biological invasions. The EFBI approach highlights several limitations inherent in current approaches to the study of biological invasions including: (i) the variance in non-native abundance across ecosystems is rarely reported; (ii) field data rarely (if ever) distinguish source from sink ecosystems; (iii) estimates of the susceptibility of ecosystems to invasion seldom account for differences in exposure to non-native species; and (iv) assessments of ecosystem susceptibility often confuse the processes that underpin patterns of spread within -and between- ecosystems. Using the invasion of lakes as a model, the EFBI approach is shown to present a new biosecurity perspective that takes account of ecosystem status and complements demographic models to deliver clearer insights into the dynamics of biological invasions at the landscape scale. It will help to identify whether management of the susceptibility of ecosystems, of the number of vectors, or of the diversity of pathways (for movement between ecosystems) is the best way of limiting or reversing the population growth of a non-native species. The framework can be adapted to incorporate increasing levels of complexity and realism and to provide insights into how to monitor, map and manage biological invasions more effectively.
机译:新出现的微卤化物(例如病毒,细菌,原生动物和真菌)流行病和引入非本地害虫和杂草是全球主要的生物安全威胁。这些威胁的可能性通常从入门,建立,传播和易于预防的概率估算。如果生态系统被认为等同于宿主,则隔间疾病模型应提供有用的框架,以理解支撑非本地物种入侵的过程。为了实现这两个学科之间的更大的交叉施肥,制定了用于生物侵犯的流行病学框架(EFBI),以根据其入侵状态分类生态系统:易感,暴露,传染性和抗性。这些状态通过与传输,延迟和恢复有关的转换相关联。这种观点与经常应用于非本地物种的物种方法不同。它允许来自流行病学的概括,例如感染力,基本生殖比R0,超级蔓延,畜群免疫力,康登斯静物接种,以便在非本地物种的新颖背景下讨论,并有助于确定重要的空白生物侵犯研究。 EFBI方法突出了目前对生物侵犯研究的目前方法中固有的几个限制,包括:(i)很少报道跨越生态系统的非本地丰度的差异; (ii)现场数据很少(如果有的话)区分来自水槽生态系统的来源; (iii)估计生态系统入侵的易感性,侵入非本土物种暴露的差异; (iv)生态系统易感性的评估通常混淆了在与生态系统之间进行的蔓延模式的过程混淆。使用湖泊作为模型的侵犯,efbi方法显示出一种新的生物安全视角,考虑了生态系统状态,并补充了人口模型,以便在景观量表中的生物侵犯动态中提供更清晰的洞察力。它将有助于确定途径数量的生态系统的易感性的易感性,途径数量(用于生态系统之间的运动)是限制或逆转非本地物种人口生长的最佳方式。该框架可以适应纳入增加的复杂性和现实程度,并为如何更有效地监测,映射和管理生物侵犯的洞察。

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