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首页> 外文期刊>IEEE/ACM transactions on computational biology and bioinformatics >Schema Matching and Data Integration with Consistent Naming on Protein Crystallization Screens
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Schema Matching and Data Integration with Consistent Naming on Protein Crystallization Screens

机译:蛋白质结晶屏幕上一致命名的架构匹配和数据集成

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摘要

The data representation as well as naming conventions used in commercial screen files by different companies make the automated analysis of crystallization experiments difficult and time-consuming. In order to reduce the human effort required to deal with this problem, we present an approach for computationally matching elements of two schemas using linguistic schema matching methods and then transform the input screen format to another format with naming defined by the user. This approach is tested on a number of commercial screens from different companies and the results of the experiments showed an overall accuracy of 97 percent on schema matching which is significantly better than the other two matchers we tested. Our tool enables mapping a screen file in one format to another format preferred by the expert using their preferred chemical names.
机译:数据表示以及不同公司商业屏幕文件中使用的命名约定使得自动分析结晶实验难以耗时。为了减少处理此问题所需的人力努力,我们使用语言模式匹配方法提出了一种用于计算两个模式的元素的方法,然后将输入屏幕格式转换为另一种格式,其中包含用户定义的命名。这种方法在不同公司的许多商业屏幕上测试,实验结果表明,在模式匹配上显示了97%的总体精度,这比我们测试的其他两种匹配更好。我们的工具可以使用他们的首选化学名称将屏幕文件用一种格式映射到专家首选的另一种格式。

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