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ChemIO: HIGH PERFORMANCE PARALLEL I/O FOR COMPUTATIONAL CHEMISTRY APPLICATIONS

机译:ChemIO:计算化学应用的高性能并行I / O

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摘要

Recent developments in I/O systems on scalable parallel computers have sparked renewed interest in out-of-core methods for computational chemistry. These methods can improve execution time sighificantly relative to direct methods, which perform many redundant computations. However, the widespread use of such out-of-core methods requires efficient and portable implementations of often complex I/O patterns. The ChemIO project has addressed this problem by defining an I/O interface that captures the I/O patterns found in important computational chemistry applications and by providing high performance implementations of this interface on multiple platforms. This development broadens the user community for parallel I/O techniques and provides new insights into the functionality required in genera) purpose scalable I/O libraries and the techniques required to achieve high performance I/O on scalable parallel computers.
机译:可伸缩并行计算机上I / O系统的最新发展引起了人们对计算化学核心方法的兴趣。与直接方法相比,这些方法可以大大缩短执行时间,直接方法可以执行许多冗余计算。但是,这种核心外方法的广泛使用要求通常复杂的I / O模式的有效且可移植的实现。 ChemIO项目通过定义一个I / O接口来解决此问题,该接口可捕获在重要的计算化学应用程序中发现的I / O模式,并通过在多个平台上提供该接口的高性能实现。这一发展拓宽了并行I / O技术的用户社区,并为通用可扩展I / O库所需的功能以及在可扩展并行计算机上实现高性能I / O所需的技术提供了新见解。

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