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首页> 外文期刊>Proceedings of the National Academy of Sciences of the United States of America >Competing interactions create functionality through frustration
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Competing interactions create functionality through frustration

机译:竞争激烈的互动通过挫折创造了功能

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摘要

Like Buridan's Ass-and somewhat ironically-we often feel frustrated if given more choice than expected. Yet, the converse appears to be true as well. Frustration that results from the impossibility of satisfying all competing interests simultaneously itself implies a greater diversity of distinct behaviors for the overall system. Nature seems to use just this unsettling device of built-in conflict to ensure adaptability and functionality at many levels of organization, ranging from the molecular scale, as in protein-conformational dynamics, to the macroscopic scale, as in socioeco-nomic processes. Identification and quantitative characterization of the precise sources of frustration is key to understanding the workings of existing systems and the ability to design new, useful systems. This task, however, is difficult for two reasons: (ⅰ) direct computational studies of systems with many states are almost always costly and often are simply out of reach for today's computer technology, and (ⅱ) once the calculation is done, even bookkeeping and grouping states are usually unobvious, again because the states are so many. In this issue of PNAS, Materese et al. (1) accomplish both tasks for the native state dynamics of a small protein, eglin c, which inhibits serine protease. By identifying the key conflicts between different physical interactions, they move us toward the goal of designing proteins that are not just sculptures but can also function.
机译:像布赖丹的“屁股”一样,有些讽刺意味的是,如果给与了更多的选择,我们常常会感到沮丧。然而,相反似乎也是如此。由于无法同时满足所有竞争利益而产生的挫败感本身就意味着整个系统的独特行为将具有更大的多样性。大自然似乎只是使用这种内置冲突的不稳定装置来确保在组织的许多层次上的适应性和功能,从分子规模(如蛋白质构象动力学)到宏观规模(如社会经济过程)。识别和精确确定挫败源的关键是理解现有系统的工作原理以及设计新的有用系统的能力的关键。但是,此任务很困难,原因有两个:(ⅰ)对具有许多状态的系统进行直接计算研究几乎总是很昂贵,并且对于当今的计算机技术而言通常是根本无法达到的;(and)一旦完成计算,甚至记账和分组状态通常不是很明显,这又是因为状态是如此之多。在本期PNAS中,Materese等人。 (1)完成小蛋白,例如抑制丝氨酸蛋白酶的天然状态动力学的两项任务。通过识别不同物理相互作用之间的关键冲突,他们使我们朝着不仅设计雕塑而且还可以发挥功能的蛋白质设计目标。

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