Genetic diversity and phylogenetic relationships of threadfin breams (Nemipterus spp.) from the Red Sea and eastern Mediterranean Sea

Ogwang Joel; Bariche Michel; Bos Arthur R.

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Genetic diversity and phylogenetic relationships of threadfin breams (Nemipterus spp.) from the Red Sea and eastern Mediterranean Sea

机译：红海和东部地中海雷丝鲷（Nemipterus SPP）的遗传多样性和系统发育关系

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The present work utilized partial sequences of cytochrome c oxidase subunit I (COI) to study Red Sea populations of threadfin breams (Nemipteridae), and compare their genetic diversity to that of Mediterranean Sea (Nemipterus randalli only) and Indo-Pacific populations. A Maximum Likelihood tree separated four fish species - N. randalli, N. japonicus, N. bipunctatus, and N. zysron - into four clades. Haplotype analyses revealed a strong case of the founder effect for the Lessepsian migrant N. randalli: Three haplotypes represented all sampled geographical ranges in the Mediterranean Sea and only one haplotype was shared with a Red Sea individual, presenting evidence that the colonizing population was founded by a small number of migrants. The Red Sea population of N. japonicus shared haplotypes with Persian Gulf and Indian Ocean populations, but South China Sea populations remained fully isolated. The haplotype networks of N. randalli and N. bipunctatus also revealed haplotype sharing between Red Sea and Indian Ocean populations. For N. zysron, one haplotype was shared between Indonesia and the Persian Gulf. We discuss the impact of continued usage of public database sequences of initially misidentified organisms and provide recommendations for avoiding distribution of sequences with incorrect scientific names.

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来源
《Genome》 |2021年第3期|共10页
作者
Ogwang Joel; Bariche Michel; Bos Arthur R.;
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作者单位

Amer Univ Cairo POB 74 AUC Ave 11835 Cairo Egypt;

Amer Univ Beirut POB 11-0236 Beirut 11072020 Lebanon;

Amer Univ Cairo POB 74 AUC Ave 11835 Cairo Egypt;

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原文格式 PDF
正文语种 eng
中图分类遗传学;医学遗传学;
关键词
COI; DNA barcoding; founder effect; haplotype diversity; Lessepsian migration;

机译：COI;DNA条形码;创始人效果;单倍型多样性;幸免度迁移;

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Genetic diversity and phylogenetic relationships of threadfin breams (Nemipterus spp.) from the Red Sea and eastern Mediterranean Sea

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