Pathogenesis related protein-1 (PR-1) genes in tomato (Solanum lycopersicum L.): Bioinformatics analyses and expression profiles in response to drought stress

Akbudak M. Aydin; Yildiz Sukran; Filiz Ertugrul

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Pathogenesis related protein-1 (PR-1) genes in tomato (Solanum lycopersicum L.): Bioinformatics analyses and expression profiles in response to drought stress

机译：番茄（Solanum Lycopersicum L.）中的发病机制相关蛋白-1（PR-1）基因：生物信息学分析和表达曲线响应干旱胁迫

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The pathogenesis-related protein 1 (PR-1) gene family play important roles in the plant metabolism in response to biotic and abiotic stresses. The present study aimed genome-wide identification and bioinformatics analyses of PR-1 genes in tomato (Solanum lycopersicum L.). The analyses resulted in the identification of 13 novel SlPR-1 genes, each of which produce a protein belonging to the CAP superfamily (PF00188). The KEGG annotation analyses revealed that the SlPR-1 proteins functioned in the environmental information processing (09130). The expression patterns of the PR-1 genes and some stress-related physiological parameters were investigated in Fusarium oxysporum sensitive and tolerant tomato varieties under drought stress. The drought stress leaded upregulation of all SlPR-1 genes, reaching up to 50 folds. The results indicate that the SlPR-1 genes play active roles in response to drought. This is the first study exhibiting the expression profiles of SlPR-1 genes under an abiotic stress, drought, in tomato.

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来源
《Genomics》 |2020年第6期|共11页
作者
Akbudak M. Aydin; Yildiz Sukran; Filiz Ertugrul;
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作者单位

Akdeniz Univ Dept Agr Biotechnol Antalya Turkey;

Akdeniz Univ Dept Agr Biotechnol Antalya Turkey;

Duzce Univ Cilimli Vocat Sch Dept Crop &

Anim Prod TR-81750 Cilimli Duzce Turkey;

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原文格式 PDF
正文语种 eng
中图分类医学遗传学;
关键词
Gene expression; Abiotic stress; RT-qPCR; MDA; H2O2;

机译：基因表达;非生物胁迫;RT-QPCR;MDA;H2O2;

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机译：番茄（Solanum Lycopersicum L.）中的发病机制相关蛋白-1（PR-1）基因：生物信息学分析和表达曲线响应干旱胁迫
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Pathogenesis related protein-1 (PR-1) genes in tomato (Solanum lycopersicum L.): Bioinformatics analyses and expression profiles in response to drought stress

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