Microarray analysis of the benthic bacterium Shewanella piezotolerans WP3 at low temperature

Jian Huahua; Li Shengkang; Tang Xixiang; Xiao Xiang

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Microarray analysis of the benthic bacterium Shewanella piezotolerans WP3 at low temperature

机译：低温下底栖细菌肺肺细菌肺炎菌属WP3的微阵列分析

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Low temperature is one of the most critical environmental factors influencing the microbial diversity and functioning of deep-sea ecosystem. In the present study, the global gene expression patterns of the deep-sea bacterium Shewanella piezotolerans WP3 at different temperatures (4 degrees C and 25 degrees C) were evaluated through DNA microarray analysis. We identified 185 and 183 genes in WP3 whose expression is increased and decreased, respectively, at 4 degrees C compared to growth at 25 degrees C. The functions of enriched genes were associated with transcription and translation, out membrane, amino acid transport and flagellar system. These data provided a transcriptome resource for the investigation of cold adaptation mechanism of deep-sea bacteria. (C) 2017 Elsevier B.V. All rights reserved.

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来源
《Marine genomics》 |2017年第2017期|共3页
作者
Jian Huahua; Li Shengkang; Tang Xixiang; Xiao Xiang;
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作者单位

Shanghai Jiao Tong Univ Sch Life Sci &

Biotechnol State Key Lab Microbial Metab Shanghai Peoples R China;

Shantou Univ Guangdong Prov Key Lab Marine Biol Shantou Peoples R China;

State Ocean Adm Inst Oceanog 3 Key Lab Marine Biogenet Resources Xiamen Peoples R China;

Shanghai Jiao Tong Univ Sch Life Sci &

Biotechnol State Key Lab Microbial Metab Shanghai Peoples R China;

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原文格式 PDF
正文语种 eng
中图分类遗传学;
关键词
Deep-sea bacterium; Low temperature; Shewanella piezotolerans; Microarray;

机译：深海细菌;低温;Shechella Piezotolerans;微阵列;

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机译：低温下底栖细菌肺肺细菌肺炎菌属WP3的微阵列分析
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Microarray analysis of the benthic bacterium Shewanella piezotolerans WP3 at low temperature

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