Mining the botulinum research literature

Regina Z. Cer; Uma Mudunuri; Robert M. StephensFrank J. Lebeda

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Mining the botulinum research literature

机译：矿业肉毒杆菌的研究文献

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The literature search section (botXminer) in the botulinum resource database (BotDB; http://botdb.abcc.ncifcrf.gov) contains a new query tool - 'Batch Search'. In basic mode, a user can submit a list of words or phrases that are used to conduct a sequential search of the titles, abstracts and MEDLINE contents of clostridial neurotoxin citations. A table of results is returned that contains the numbers of citations found for each query term that are, in turn, linked to information from PubMed and MEDLINE for each citation. In matrix mode, a user can join two lists of user-defined terms in which all of the results from the combinatorial pairs are returned in a matrix. Each matrix element is linked to a citation list. In both modes, searches can berefined by selecting a range of publication years. Examples of 'Batch Search' matrices are statistically analysed for their quality by calculating their recall and precision values.

机译：文献检索部分(botXminer)肉毒杆菌资源数据库(BotDB;http://botdb.abcc.ncifcrf.gov)包含一个新的查询工具——“批量搜索”。用户可以提交一个单词或短语列表用于进行顺序搜索的标题、摘要和MEDLINE的内容梭菌属的神经毒素引用。返回结果,其中包含的数量为每个查询词引用发现,从PubMed和相关信息为每一个引用MEDLINE。可以加入两个列表的用户定义的条件吗所有的组合的结果返回一个矩阵。与一个引用列表。搜索可以通过选择一个范围的berefined出版年。矩阵的统计分析质量通过计算他们的查全率和查准率值。

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来源
《The Botulinum Journal》 |2009年第3期|270-280|共11页
作者
Regina Z. Cer; Uma Mudunuri; Robert M. StephensFrank J. Lebeda;
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作者单位

Advanced Biomedical Computing Center, Information Systems Program, SAIC-Frederick Inc., NCI-Frederick, Frederick, MD 21702, USA;

Research Area Directorate 2, US Army Medical Research and Materiel Command, 504 Scott Street, Ft. Derrick, MD 20702-5012, USA;

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原文格式 PDF
正文语种英语
中图分类微生物学;
关键词
Database; MEDLINE; Controlled VocabularySearchesPrecisionMatrix Element;

机译：数据库、MEDLINE、控制VocabularySearchesPrecisionMatrix元素;

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Mining the botulinum research literature

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