Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701 T ) and emended description of the genus Thermanaerovibrio

Krishna Palaniappan; Jan P. Meier-Kolthoff; Hazuki TeshimaMatt NolanAlla LapidusHope TiceTijana Glavina Del RioJan-Fang ChengCliff HanRoxanne TapiaLynne A. GoodwinSam PitluckKonstantinos LioliosKonstantinos MavromatisIoanna PaganiNatalia IvanovaNatalia MikhailovaAmrita PatiAmy ChenManfred RohdeShanmugam MayilrajStefan SpringJohn C. DetterMarkus GökerJames BristowJonathan A. EisenVictor MarkowitzPhilip HugenholtzNikos C. KyrpidesHans-Peter KlenkTanja Woyke

首页> 外文期刊>Environmental Microbiomes >Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701 T ) and emended description of the genus Thermanaerovibrio

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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701 T ) and emended description of the genus Thermanaerovibrio

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Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae, a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans. In addition to Su883T, the type strain of T. acidaminovorans, stain Z-9701T is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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来源
《Environmental Microbiomes》 |2014年第1期|57-70|共14页
作者
Krishna Palaniappan; Jan P. Meier-Kolthoff; Hazuki TeshimaMatt NolanAlla LapidusHope TiceTijana Glavina Del RioJan-Fang ChengCliff HanRoxanne TapiaLynne A. GoodwinSam PitluckKonstantinos LioliosKonstantinos MavromatisIoanna PaganiNatalia IvanovaNatalia MikhailovaAmrita PatiAmy ChenManfred RohdeShanmugam MayilrajStefan SpringJohn C. DetterMarkus GökerJames BristowJonathan A. EisenVictor MarkowitzPhilip HugenholtzNikos C. KyrpidesHans-Peter KlenkTanja Woyke;
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作者单位

DOE Joint Genome Institute;

Leibniz Institute, DSMZ - German Collection of Microorganisms and Cell Cultures;

Bioscience Division, Los Alamos National LaboratoryT. Dobzhansky Center for Genome BionformaticsAlgorithmic Biology LabBiological Data Management and Technology Center, Lawrence Berkeley National LaboratoryHZI - Helmholtz Centre for Infection ResearchMTCC - Microbial Type Culture CollectionandGene Bank, CSIR-Institute of Microbial TechnologyUniversity of California Davis Genome CenterAustralian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland;

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正文语种英语
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obligate anaerobic; motile; curved rods; organotrophic; S0-reduction; cyanobacterial mat; Synergistaceae; Synergistetes; GEBA;

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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701 T ) and emended description of the genus Thermanaerovibrio

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