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A novel temperature control method for shortening thermal cycling time to achieve rapid polymerase chain reaction (PCR) in a disposable polymer microfluidic device.

机译:一种新颖的温度控制方法,用于缩短热循环时间,以在一次性聚合物微流体装置中实现快速聚合酶链式反应(pCR)。

摘要

We present a new temperature control method capable of effectively shortening the thermal cycling time of polymerase chain reaction (PCR) in a disposable polymer microfluidic device with external heater and temperature sensor. The method employs optimized temperature overshooting and undershooting steps to achieve a rapid ramping between the temperature steps for DNA denaturation, annealing and extension. The temperature dynamics within the microfluidic PCR chamber was characterized and the overshooting and undershooting parameters were optimized using the temperature dependent fluorescence signal from Rhodamine B. The method was validated with PCR amplification of mecA gene (162 bp) from Methicillin-resistant Staphylococcus aureus bacterium (MRSA), where the time for 30 cycles was reduced from 50 min (without over- and undershooting) to 20 min.
机译:我们提出了一种新的温度控制方法,该方法能够有效地缩短带有外部加热器和温度传感器的一次性聚合物微流体装置中聚合酶链反应(PCR)的热循环时间。该方法采用优化的温度超调和下调步骤,以实现DNA变性,退火和延伸的温度步骤之间的快速上升。表征了微流体PCR室中的温度动态,并使用了若丹明B产生的温度依赖性荧光信号来优化过冲和下冲参数。通过PCR扩增耐甲氧西林金黄色葡萄球菌细菌(mecA基因)(162 bp)验证了该方法的有效性。 MRSA),其中30个周期的时间从50分钟(没有过冲和下冲)减少到20分钟。

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