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Method for the identification and isolation of binding polypeptides from combinatorial libraries of proteins having the scaffold structure of C-type lectin-like domains

机译:从具有C型凝集素样结构域的支架结构的蛋白质的组合文库中鉴定和分离结合多肽的方法

摘要

A novel family of protein libraries comprising CTLDs (C-type Lectin-Like Domains) in which internal polypeptide loop-regions lining the ligand binding sites in CTLDs have been replaced with ensembles of completely or partially randomised polypeptide segments. Tetranectin CTLDs were chosen as framework for the preferred embodiment of the invention; and versatile phagemid vectors useful in the generation and manipulation of human and murine tetranectin CTLD libraries are disclosed as part of this invention. Tetranectin CTLDs in monomeric as well as in trimeric form are efficiently displayed as gene III fusions in fully functional form by the recombinant fd phage display vector. CTLD derivatives with affinity for new ligands may readily be isolated from libraries of vectors displaying CTLDs, in which loop-regions have been randomised, using one or more rounds of enrichment by screening or selection followed by amplification of the enriched subpopulation in each round. The efficiency with which protein products containing CTLDs with new binding properties can be produced, e.g. by bacterial expression and in vitro refolding, in mono-, tri-, or multimeric formats provides important advantages in terms of simplicity, cost and efficiency of generation, production and diagnostic or therapeutic applications in comparison to recombinant antibody derivatives.
机译:包含CTLD(C型凝集素样结构域)的新型蛋白质文库家族,其中衬在CTLD中配体结合位点的内部多肽环区域已被完全或部分随机的多肽片段的集合所取代。选择四联蛋白CTLD作为本发明优选实施方案的框架;参见图1。作为本发明的一部分,公开了在人和鼠四连蛋白CTLD文库的产生和操作中有用的多种噬菌粒载体。重组fd噬菌体展示载体将单体形式和三聚体形式的四联蛋白CTLD有效地展示为功能齐全的基因III融合体。对新配体具有亲和力的CTLD衍生物可以很容易地从展示CTLD的载体库中分离出来,其中通过筛选或选择进行一轮或多轮富集,然后在每一轮中扩增富集的亚群,从中随机选择了环区。可以生产含有具有新结合特性的CTLD的蛋白质产品的效率,例如与重组抗体衍生物相比,通过细菌表达和体外重折叠以单聚,三聚或多聚形式表达,在产生,生产和诊断或治疗应用的简便性,成本和效率方面提供了重要的优势。

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