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Strategies that have been improved for sequencing complex genomes using high-throughput sequencing technology

机译:使用高通量测序技术对复杂基因组进行测序的策略已得到改进

摘要

A step of digesting the genome with the restriction endonuclease of the first one, and a step of ligating the restriction fragments of the first subset, the adapter ligated restriction fragments using a combination of the first primer, at least one adapter least A step of selectively amplifying the first set of, the first primer, containing (including selective nucleotides 1-10) select the first sequence to the 3 'end of the primer sequence, a step of amplifying, comprising the steps of repeating these processes by using a combination of the second primer at least the steps of containing a selected sequence of different second repeat, primers, adapters ligated restriction fragments are amplified A process of fragmenting each subset, and there the step of generating a sequencing library thereby fragmenting, and determining steps the nucleotide sequence of the fragment, in the step of aligning the sequences of the fragments in the library, respectively Te, the method comprising: generating contigs thereby aligning, a step of repeating these steps for further restriction endonuclease and / or a second restriction endonuclease one further restriction endonucleases, and / or a second restriction endonuclease the method comprising aligning the contigs obtained for each nuclease, a step of providing a sequence of the genome thereby align, method for determining a genome sequence.
机译:用第一个限制性核酸内切酶消化基因组的步骤,以及连接第一亚组的限制性片段的步骤,所述衔接子使用第一引物,至少一个衔接子的组合连接限制性片段至少一个扩增第一组,包含(包括选择性核苷酸1-10)的第一引物,选择第一序列至引物序列的3'端,这是扩增步骤,包括通过组合使用重复上述过程的步骤第二引物至少包括以下步骤:扩增包含不同的第二重复序列,引物,衔接子的限制性片段的选定序列。片段化每个子集的过程,然后生成测序文库从而片段化,并确定核苷酸序列的步骤在将所述片段的片段的序列分别比对文库中的片段的步骤中,所述方法包括: ng重叠群,从而进行比对,重复这些步骤以进一步限制核酸内切酶和/或第二限制性核酸内切酶,一个其他限制核酸内切酶,和/或第二限制性核酸内切酶,该方法包括比对每种核酸酶获得的重叠群,提供基因组序列的比对,从而确定基因组序列的方法。

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