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In situ method for differentiating homologous DNA sequences, useful in medical diagnosis and research, by fluorescence microscopic comparison of chromosomes or interphase nuclei

机译:通过染色体或相间核的荧光显微镜比较,用于区分同源DNA序列的原位方法,可用于医学诊断和研究

摘要

In situ method for differentiating homologous DNA sequences in which chromosomes or interphase nuclei of the test material are evaluated and compared, by fluorescence microscopy, for presence of polymorphic differences at the DNA level. In situ method for differentiating homologous DNA sequences in which chromosomes or interphase nuclei of the test material are evaluated and compared, by fluorescence microscopy (FM), for presence of polymorphic differences at the DNA level. These DNA sequences (or segments of them) are examined for known DNA polymorphisms (P), then detected (P) that are relevant to the particular analysis being done, are used to select, amplify and label (e.g. with fluorescent dyes or haptens) one or more DNA sequences or bacterial artificial chromosomes (BAC). These materials are combined, e.g. in chromosome-specific sets and, together with preferably Cot-1 DNA, are denatured to produce single-stranded probes, containing sequences homologous with the material being examined, and these are hybridized to carriers, preferably at about 37[deg]C, then washed, rinsed, dehydrated, dried and counterstained (e.g. with DAPI) for evaluation by FM. The fluorescent signals from the test material, and those for the carrier-hybridized DNA probes, are compared and evaluated for differences in DNA sequences as regards reproducible intensity differences.
机译:用于区分同源DNA序列的原位方法,其中通过荧光显微术评估并比较了测试材料的染色体或相间核,以比较DNA水平上多态性的存在。用于区分同源DNA序列的原位方法,在该方法中,通过荧光显微镜(FM)评估并比较了测试材料的染色体或相间核,以检测DNA水平上的多态性差异。检查这些DNA序列(或其片段)的已知DNA多态性(P),然后检测与所进行的特定分析相关的(P),用于选择,扩增和标记(例如,使用荧光染料或半抗原)一个或多个DNA序列或细菌人工染色体(BAC)。这些材料被组合在一起,例如将其与染色体特异的序列一起,优选与Cot-1 DNA一起变性,以产生单链探针,其包含与所检查的材料同源的序列,并优选在约37℃下与载体杂交,然后洗涤,漂洗,脱水,干燥和复染(例如,使用DAPI)以进行FM评估。比较来自测试材料的荧光信号以及用于载体杂交的DNA探针的荧光信号,并就可再现的强度差异评估DNA序列的差异。

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