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The method and apparatus of the complex genetic classification based on the primary / secondary curve analysis and correspondence analysis

机译:基于一次/二次曲线分析和对应分析的复杂遗传分类方法和装置

摘要

Methods and apparatus for use in complex genetics classification are disclosed. In one illustrative example, a method is performed using data from a sample population which includes counts of individuals in the sample population associated with both a particular diploid haplotype pair and a particular genetic trait class. A correspondence to analysis (COA) on the data from the sample population is performed (at least in part) so as to determine a first plurality of n-dimensional coordinates for each diploid haplotype pair and a second plurality of n-dimensional coordinates for each genetic trait class. A linear or quadratic classification analysis is then performed based on the first and the second pluralities of n-dimensional coordinates and diploid haplotype pairs of the at least two genes from an individual sample. Advantageously, the individual sample can be accurately classified into one of the genetic trait classes using the method.
机译:公开了用于复杂遗传学分类的方法和设备。在一个说明性实例中,使用来自样本群体的数据执行一种方法,该数据包括与特定二倍体单倍型对和特定遗传性状类别两者相关联的样本群体中的个体计数。对来自样本群体的数据进行与分析(COA)的对应关系(至少部分),以便为每个二倍体单倍型对确定第一组多个n维坐标,为每个组确定第二组多个n维坐标遗传性状类。然后基于来自单个样品的至少两个基因的第一和第二多个n维坐标和二倍体单倍型对,进行线性或二次分类分析。有利地,使用该方法可以将个体样品准确地分类为遗传性状类别之一。

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