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首页> 外文会议>International Conference on Computational Science and Its Applications(ICCSA 2006) pt.1; 20060508-11; Glasgow(GB) >SimVIZ — A Desktop Virtual Environment for Visualization and Analysis of Protein Multiple Simulation Trajectories
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SimVIZ — A Desktop Virtual Environment for Visualization and Analysis of Protein Multiple Simulation Trajectories

机译：SimVIZ —用于蛋白质多模拟轨迹的可视化和分析的桌面虚拟环境

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摘要

In silico protein conformation simulation generates massive amounts of data which needs to be properly visualized and analyzed. We are applying Desktop Information-Rich Virtual Environments (Desktop IRVE's) techniques and concepts to aid multiple trajectory simulation analysis, improving user experience and developing a problem-solving environment to help the decision making process. We will present SimVIZ, a tool which integrates visualization to simulation analysis, improving previous knowledge about trajectories. This environment shows informative panels, Contact Maps, RMSD charts, the Ramachandran Plot and a Parallel Coordinate multidimensional visualization of simulation output in a single rendering scene. SimVIZ also opens multiple trajectories along with user associated information concerning many aspects of the simulation. SimVIZ is an integrated problem solving environment of multiple trajectories of protein simulations, offering various kinds of analysis and visualization tools used by the community to validate protein structures or to gather a better understanding of the protein folding process.
机译：在计算机模拟中，蛋白质构象模拟会生成大量数据，需要正确地对其进行可视化和分析。我们正在应用富含桌面信息的虚拟环境（Desktop IRVE）的技术和概念来帮助进行多轨迹仿真分析，改善用户体验并开发解决问题的环境以帮助决策过程。我们将介绍SimVIZ，这是一种将可视化与仿真分析相集成的工具，可改善先前对轨迹的了解。该环境显示了信息面板，联系地图，RMSD图表，Ramachandran图和单个渲染场景中模拟输出的平行坐标多维可视化。 SimVIZ还打开了多个轨迹以及与用户有关的模拟相关许多方面的信息。 SimVIZ是蛋白质模拟的多个轨迹的集成问题解决环境，为社区提供了各种分析和可视化工具，以验证蛋白质结构或更好地理解蛋白质折叠过程。

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