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3D Digitization and Modeling of Flower Mutants of Arabidopsis Thaliana

机译:拟南芥花突变体的3D数字化和建模

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摘要

The recently developed 3D plant modeling tools have strongly increased the potential of model applications in crop sciences. Visualisation of specific genotypes of plant species in 3D is one possible application. In this paper an approach is presented to model in 3D a number of genotypes of Arabidopsis Thaliana that differ in flower morphology. The method entails the collection of the 3D data, parameterisation of the 3D model and subsequent generation of the 3D image of the plant genotype. The profiling method was used to create 3D images of existing plants by merging 2D digital pictures of the plant silhouette to a 3D object. The data from the digitised plants were used to determine geometrical parameters that are required for the architectural model, based on the L-systems algorithm. The architectural model was able to simulate a number of flower mutants of Arabidopsis. The potentials of the model to simulate simple gene expressions controlled by environmental conditions are discussed, as well as future possibilities to incorporate physiological processes. Some possibilities to use the 3D model to simulate different genotypes of ornamental plant species are put forward. The concept of the virtual plant is acknowledged as a powerful tool to understand and visualise plant growth and appearance.
机译:最近开发的3D植物建模工具极大地提高了作物科学中模型应用的潜力。在3D模式下可视化植物物种的特定基因型是一种可能的应用。在本文中,提出了一种方法来以3D建模多种花形不同的拟南芥基因型。该方法需要收集3D数据,对3D模型进行参数化以及随后生成植物基因型的3D图像。通过将植物轮廓的2D数字图片合并到3D对象,使用轮廓分析方法创建现有植物的3D图像。基于L系统算法,将来自数字化工厂的数据用于确定建筑模型所需的几何参数。该建筑模型能够模拟拟南芥的许多花卉突变体。讨论了该模型模拟由环境条件控制的简单基因表达的潜力,以及纳入生理过程的未来可能性。提出了使用3D模型模拟观赏植物物种不同基因型的一些可能性。虚拟植物的概念被认为是了解和可视化植物生长和外观的强大工具。

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