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cDNA-AFLP Identifies Differently Expressed Transcripts of a Novel Late-ripening Citrus sinensis Mutant Potentially elated to Fruit Ripening

机译:cDNA-AFLP识别不同表达的新型柑橘Sinensis突变体潜在地升高到果实成熟的转录物

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'Fengjiewancheng' (FJWC) is a late-ripening bud sport of 'Fengjie72-1' navel orange (Citrus sinensis Osbeck). In the present research, using cDNA-amplified fragment length polymorphism, we compared the transcript difference between fruits of the two varieties during ripening. As a result, about 60 000 clear transcript-derived fragments (TDFs) were generated with band sizes ranging from 50 to 500bp, of which 127 TDFs were down regulated (88.2%) and 17 were up-regulated (11.8%) in FJWC while compared with FJ72-1. Blast annotation indicated that 39 uniTDFs, which mainly located in mitochondria (26%)and membrane system (44%), were assigned with putative function in signal transduction, control of gene expression and carbohydrate biosynthesis, involving in extensive biological processes such as response to stimulus (12%), transport (12%), cellular metabolic process (12%), post-translational protein modification (12%), micromolecule biosynthesis (12%), transcription (10%), cellular localization (10%), phosphate metabolic process (10%)and developmental process (10% ). In addition, some TDFs showed relatively high identities with known functional genes and had differential expression patterns in fruit pulp or peel between FJWC and FJ72-1 during fruit ripening, implying a potential role in the formation of the late-ripening phenotype.
机译:'凤庚海城'(FJWC)是'凤杰72-1'肚脐橙(柑橘Sinensis Osbeck)的后期成熟芽运动。在本研究中,使用cDNA扩增的片段长度多态性,我们比较了在成熟过程中两种品种的果实之间的转录物差异。结果,用50至500bp的带尺寸产生约60 000个透明的转录物衍生片段(TDF),其中127个TDF在下调(88.2%)和17个在FJWC中调节(11.8%)与FJ72-1相比。 BLAST注释表明,主要位于线粒体(26%)和膜系统(44%)的39个UNERDF,用于指定功能在信号转导,控制基因表达和碳水化合物生物合成中,涉及广泛的生物过程,如响应刺激(12%),运输(12%),细胞代谢过程(12%),翻译后蛋白质改性(12%),微麻骨合成(12%),转录(10%),细胞定位(10%),磷酸盐代谢过程(10%)和发育过程(10%)。此外,一些TDFS显示出具有已知的功能基因的相对高的身份,并且在果实成熟期间FJWC和FJ72-1之间的果肉或果皮中具有差异表达模式,这意味着在后期成熟表型中的形成中的潜在作用。

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