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An Efficient Model for Investigating Specific Site Binding of Transcription Factors

机译:研究转录因子特定位点结合的有效模型

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We present an individual agent-based model of transcription factor binding to DNA. We explicitly represent every single transcription factor and every single binding site in our simulation. In order to obtain statistically significant results from our model, it is necessary to perform a large number of simulations. This has previously been hampered by the computational demands of individual agent-based models. Here we present an approach to make such simulations feasible using approaches related to dynamic memory allocations in computer systems.
机译:我们提出了基于个体因子的转录因子与DNA结合的模型。我们在模拟中明确表示每个转录因子和每个结合位点。为了从我们的模型获得具有统计意义的结果,有必要执行大量的模拟。以前,这已被各个基于代理的模型的计算需求所阻碍。在这里,我们提出一种使用与计算机系统中动态内存分配相关的方法使这种模拟可行的方法。

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